SNP Pos.

243

342

360

384

396

414

438

465

466

497

500

511

534

537

538

547

551

557

564

571

572

573

605

622

635

637

657

717

771

774

Strain number/Species/Symbol Standard sequence

G

C

G

C

A

C

A

C

C

T

T

G

G

A

G

T

A

G

C

A

T

T

A

T

T

A

C

G

T

C

1

k-aaa001

ananassae

AABBg1

A01_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

G

C

A

N

T

A

T

T

N

Y

N

T

C

A01_r

C

G

C

A

C

A

C

C

T

T

G

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

2

k-aa609

ananassae

e pi;bri ru

B01_f

G

C

G

C

A

C

A

C

C

T

T

G

B01_r

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

3

k-aa611

ananassae

e se; bri ru

C01_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

G

C

A

W

T

A

T

T

N

Y

N

C01_r

C

C

T

T

G

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

4

non opened stock

ananassae

Om(2C)+ Arc+

D01_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

G

C

A

T

T

A

T

T

N

Y

N

T

C

D01_r

C

G

C

A

C

A

C

C

T

T

G

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

5

k-aa214

ananassae

ca

E01_r

C

G

C

A

C

A

C

C

T

T

G

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

E02_f

G

C

G

C

A

C

A

C

C

T

T

G

6

k-aa329

ananassae

px

F01_r

G

C

A

C

A

C

C

T

T

G

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

F02_f

G

C

G

C

A

C

A

C

C

T

T

G

7

k-aa607

ananassae

ca;px B5/B6

G01_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

G

C

A

N

T

A

T

T

N

Y

N

G01_r

C

G

C

W

C

A

C

Y

T

T

G

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

8

k-aa307

ananassae

bri pe stw

H01_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

G

C

A

N

T

A

T

T

N

Y

N

T

C

H01_r

C

G

C

A

C

A

C

C

T

T

G

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

9

k-aa309

ananassae

bri pe stw px

A02_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

G

C

A

N

T

A

T

T

N

Y

N

T

C

A02_r

G

C

A

C

A

C

C

T

T

G

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

10

not opened stock

ananassae

Om(2C)8 Arc

B02_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

G

C

A

N

T

A

T

T

N

Y

N

T

C

B02_r

C

G

C

A

C

A

C

C

T

T

G

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

11

k-aaa020

ananassae

Tonga

C02_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

T

G

C

A

N

T

A

T

T

N

Y

N

T

C

C02_r

C

G

C

A

C

A

C

C

T

T

G

N

R

G

T

T

N

C

A

T

T

A

T

T

N

C

G

T

C

12

k-aaa226

ananassae

TBU209

D02_f

N

D03_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

G

C

A

T

T

A

T

T

N

Y

N

T

C

13

not opened stock

ananassae

Hawaii-wh

E02_r

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

E03_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

G

C

A

N

T

A

T

T

N

Y

N

T

C

14

not opened stock

ananassae

L8-2

F02_r

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

F03_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

G

C

A

N

T

A

T

T

N

Y

N

15

k-aa802

ananassae

ananassae-y-BR

G02_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

G

C

A

T

T

A

T

T

N

Y

N

T

C

G02_r

G

C

A

C

A

C

C

T

T

G

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

16

k-aa801

ananassae

ananassae-y-IM

H02_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

A

C

A

T

T

A

T

A

N

Y

N

T

C

H02_r

G

C

A

C

A

C

C

T

T

G

N

R

G

T

N

A

C

A

T

T

A

T

A

N

C

G

T

C

17

k-aa111

ananassae

Om(1A)15[E]sn sc rb

A03_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

G

C

A

N

T

A

T

T

N

Y

N

T

C

A03_r

C

G

C

A

C

A

C

C

T

T

G

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

18

k-aa115

ananassae

Om(1D)f[49]Bx[2]w[65]

B03_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

G

C

A

T

T

A

T

T

N

Y

N

T

C

B03_r

C

A

C

A

C

C

T

T

G

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

19

k-aa236

ananassae

Pr Om(2F)27

C03_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

G

C

A

N

T

A

T

T

N

Y

N

T

C

C03_r

G

C

A

C

A

C

C

T

T

G

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

20

k-aa235

ananassae

Pr

D03_r

G

C

A

C

A

C

C

T

T

G

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

D04_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

G

C

A

N

T

A

T

T

N

Y

N

T

C

21

k-aa217

ananassae

cd cu e

E03_r

C

G

C

A

C

A

C

C

T

T

G

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

E04_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

G

C

A

N

T

A

T

T

N

Y

N

T

C

22

not opened stock

ananassae

ca Sb Arc

F03_r

C

G

C

A

C

A

C

C

T

T

G

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

F04_f

G

C

R

C

A

C

A

C

C

T

T

23

k-aa703

ananassae

f[83i];e su;bri ru

G03_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

G

C

A

T

T

A

T

T

N

Y

N

T

C

G03_r

C

A

C

A

C

C

T

T

G

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

24

not opened stock

ananassae

bri pe stw Om(3F)

H03_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

G

C

A

N

T

A

T

T

N

Y

N

T

C

H03_r

G

C

A

C

A

C

C

T

T

G

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

25

not avaulable

ananassae

L170

A04_f

G

C

A

C

A

C

A

A

A

T

T

C

N

A

G

T

A

G

C

A

W

T

A

T

T

N

Y

N

T

C

A04_r

C

A

C

A

C

A

A

A

T

T

C

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

26

k-aaa222 or k-aaa255

ananassae

N87

B04_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

T

G

C

A

N

T

A

T

T

N

Y

N

T

C

B04_r

C

G

C

A

C

A

C

C

T

T

G

N

R

G

T

T

G

C

A

T

T

A

T

T

N

C

G

T

C

27

k-aaa228

ananassae

GUM109

C04_f

G

C

G

C

A

C

A

C

C

T

T

G

C04_r

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

28

k-aaa027

ananassae

OGS98-k1

D04_r

C

G

C

A

C

A

C

C

T

T

G

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

D05_f

G

C

G

T

A

T

A

C

C

C

A

G

A

A

N

A

A

G

C

A

A

T

N

T

T

T

Y

C

C

C

29

not opened stock

ananassae

Yonaguni

E04_r

C

G

C

A

C

A

C

C

T

T

G

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

E05_f

G

C

G

T

A

T

A

C

C

C

A

G

A

A

N

A

A

G

C

A

A

T

N

T

T

T

Y

C

C

C

30

not opened stock

ananassae

M28F20

F04_r

N

R

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

F05_f

G

C

G

T

A

C

A

C

C

C

A

G

A

A

N

A

A

G

C

A

A

N

N

T

T

N

Y

C

C

C

31

k-aaa100

ananassae

VAV150

G04_f

G

C

G

C

A

C

A

C

C

T

T

G

N

G

G

T

A

G

C

A

N

T

A

T

T

N

Y

N

G04_r

C

G

C

A

C

A

C

C

T

T

G

N

G

G

T

N

G

C

A

T

T

A

T

T

N

C

G

T

C

32

k-aas003

parapallidosa

IRO21

H04_f

G

C

G

T

A

C

A

T

C

T

H04_r

A

A

T

N

T

T

N

C

N

T

C

33

k-aas011

parapallidosa

T184

A05_f

G

C

G

T

A

C

A

T

C

T

A05_r

A

A

T

N

T

T

N

C

N

T

C

35

k-aae002

pallidosa

NAN24

C05_f

G

C

G

T

A

C

A

C

C

C

A

G

A

A

N

A

A

G

C

A

A

T

N

T

T

N

Y

C

C

C

C05_r

C

G

Y

A

C

A

C

C

N

N

G

A

W

T

A

N

G

C

A

A

T

N

T

T

N

C

N

C

C

36

k-aae006

pallidosa

TBU155

D05_r

C

G

Y

A

T

A

C

C

N

N

G

A

W

T

A

N

G

C

A

A

T

N

T

T

T

C

N

C

C

D06_f

G

T

G

T

N

C

A

C

C

C

A

G

N

A

G

A

A

G

C

G

K

T

N

T

T

T

T

C

T

G

37

k-aa803

pallidosa

pallidosa-IM

E05_r

A

W

T

A

N

R

C

A

N

T

N

T

T

T

Y

N

C

C

E06_f

G

T

G

T

N

C

A

C

C

C

A

G

N

A

G

A

A

G

A

G

K

T

N

T

T

N

Y

C

T

C

38

k-aa804

pallidosa

pallidosa--BR

F05_r

C

G

Y

A

C

A

C

C

N

N

G

A

W

T

A

N

G

C

A

A

N

N

T

T

N

C

N

C

C

F06_f

G

T

G

T

N

C

T

C

C

C

A

G

N

A

G

A

A

G

C

G

K

T

N

M

T

N

Y

C

T

C

39

k-aau001?

pallidosa-like

LAE345-IM

G05_f

G

C

G

T

A

C

A

C

C

C

A

G

A

N

N

A

A

G

C

A

A

N

N

T

T

N

Y

C

C

C

G05_r

C

R

Y

A

C

A

C

C

N

N

G

A

W

T

A

N

G

Y

A

A

N

N

T

T

N

N

N

C

C

40

k-aau001?

pallidosa-like

LAE345-BR

H05_f

G

C

G

T

A

C

A

C

C

C

A

G

A

A

N

A

A

G

C

A

A

N

N

T

T

N

Y

C

C

C

H05_r

G

Y

A

C

A

C

C

N

N

G

A

W

T

A

N

G

C

A

A

N

N

T

T

N

C

N

C

C

44

k-aat003

papuensis-like

WAU142

D06_r

N

G

Y

G

C

A

C

C

N

N

G

N

R

G

A

N

G

C

G

T

T

N

T

T

T

T

N

T

G

E01_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

G

C

A

N

T

A

T

T

N

Y

N

45

k-aat007

papuensis-like

LAE360

E06_r

N

G

Y

G

C

A

C

C

N

N

G

N

R

G

A

N

G

A

G

T

T

N

T

T

N

C

N

T

C

F01_f

G

C

G

C

A

C

A

C

C

T

T

G

N

A

G

T

A

G

C

A

N

T

A

T

T

N

Y

N

T

C

46

k-aat002

papuensis-like

AUS51

F06_r

N

G

Y

G

C

T

C

C

N

N

G

N

R

G

A

N

G

C

G

T

T

N

A

T

N

C

N

T

C