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SNPs found in the position P005

The numbers in the top row is the position in the expected PCR fragment amplified in silico from the publicly available D. melanogaster genome sequence (ST). You can see it by clicking each gene symbol in the previous table. Colored cells show nucleotides different from the ST sequence. Red: fixed SNPs (G, A, T or C) for each strain. Pink: polymorphic SNPs. Gray: Not determined (N).

Strain 171 183 234 288 313 357 381 394 402 426 486 492 520 528 529 549 564 640 668 693 695 701 715 768
ST A A G A T A G C T A A A A A T G G C C A T A G T
S01 A A G A T A G C T A A A A A T G G C C A T A G T
S02 A A G A T A G C T A A A A A T G G C C A T A G T
S03 A A G A T A G C T A A A A A T G G C C A T A G T
S04 A A G A T A G C T A A A A A T G G C C A T A G T
S05 A A G A T A G C T A A A A A T G G C C A T A G T
S06 A A G A T A G C T A A A A A T G G C C A T A G T
S07 A A G A T A G C T A A A A A T G G C C A T A G T
S08 A A G A T A G C T A A A A A T G G C C A T A G T
S09 A A G A T A G C T A A A A A T G G C C A T A G T
S10 A A G A T A G C T A A A A A T G G C C A T A G T
S11 A A G A T A G C T A A A A A T G G C C A T A G T
S12 A A G A T A G C T A A A A A T G G C C A T A G T
S13 A A G A T A G C T A A A A A T G G C C A T A G T
S14 A A G A T A G C T A A A A A T G G C C A Y A G T
S15 A A G A T A G C T A A A A A T G G C C A T A G T
S16 A A G A T A G C T A A A A A T G G C C A T A G T
S17 A A G A T A G C T A A A A A T G G C C A T A G T
S18 A A G A T A G C T A A A A A T G G C C A T A G T
S19 A A G A T A G C T A A A A A T G G C C A T A G T
S20 A A G A T A G C T A A A A A T G G C C A T A G T
S21 A A G A T A G C T A A A A A T G G C C A T A G T
S22 A A G A T A G C T A A A A A T G G C C A Y A G T
S23 A A G A T A G C T A A A A A T G G C C A T A G T
S24 A A G A T A G C T A A A A A T G G C C A T A G T
S25 A A G A T A G C T A A A A A T G G C C A T A G T
S26 A A G A T A G C T A A A A A T G G C C A T A G T
S27 A A G A T A G C T A A A A A T G G C C A T A G T
S28 A A G A T A G C T A A A A A T G G C C A T A G T
S29 A A G A T A G C T A A A A A T G G C C A T A G T
S30 A A G A T A G C T A A A A A T G G C C A T A G T
S31 A A G A T A G C T A A A A A T G G C C A T A G T
S32 A A G A T A G C T A A A A A T G G C C A T A G T
S33 N G N N T G K Y C G G G T T G C M C C G G C G N
S34 N G N N C           G G T T G S N C C N G C G N
S35 N G N N C G K Y C G G G T T G S N C C N G C G N
S36 N G N N T G K Y C G G G T H G C G C C N G C G N
S37 T G C G C G G T C G G C T H G G C C C A G C C G
S38           G A T C G A G T T G G G C C A G C G N
S39           G A T C G A G T T G G G C C A G C C N
S40 G G N N T G         A G T T G S N C C A G C G N
 

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