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SNPs found in the position P020

The numbers in the top row is the position in the expected PCR fragment amplified in silico from the publicly available D. melanogaster genome sequence (ST). You can see it by clicking each gene symbol in the previous table. Colored cells show nucleotides different from the ST sequence. Red: fixed SNPs (G, A, T or C) for each strain. Pink: polymorphic SNPs. Gray: Not determined (N).

Strain 189 228 246 258 288 315 324 334 343 345 363 375 387 393 405 426 447 477 498 500 534 553 561 576 609 672 696 727 753 780 819 822
ST C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C T
S01 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S02 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S03 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S04 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S05 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S06 C C T T C T C G T G A A A G T C C C A A A T C C C G T C C C C W
S07 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S08 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S09 C C T T C T C G T G R A A G T C C C A A A T C C C G T C C C C W
S10 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S11 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S12 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S13 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S14 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S15 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S16 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S17 C C T T C T C G T G R A A G T C C C A A A T C C C G T C C C C W
S18 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S19 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S20 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S21 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S22 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S23 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S24 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S25 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C T
S26 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S27 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S28 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C T
S29 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C T
S30 C C T T C T C G T G A A A G T C C C A A A T C C C G T C C C C W
S31 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S32 C C T T C T C G T G G A A G T C C C A A A T C C C G T C C C C W
S33 C T T C T G T G C A G A R A C A T C G A G C C C C T C C C C G C
S34 C C T C T G T A T A G G R G C C C C A A G C C A C G C C C T G C
S35 C C T C T G T A T A G G R G C C C C A A G C C A C G C C C T G C
S36 C C A C T T C G T A G A R G C A C C A A G C C A C G C C C T G C
S37 C C A C T T C G T A G A R G C A C C G A G C C C C G C C C C G C
S38 T C T C T T T G T A G A R G C A C C G A G C C C C G C C C C G C
S39 T C T C T T T G T A G A R G C A C C G A G C C C C G C C C C G C
S40 C C T C T G T G T A G A R G C C C T G A G C A C A G C T T C G C

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