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SNPs found in the position P002

The numbers in the top row is the position in the expected PCR fragment amplified in silico from the publicly available D. melanogaster genome sequence (ST). You can see it by clicking each gene symbol in the previous table. Colored cells show nucleotides different from the ST sequence. Red: fixed SNPs (G, A, T or C) for each strain. Pink: polymorphic SNPs. Gray: Not determined (N).

Strain 79 124 147 160 163 205 213 264 280 303 304 316 319 333 343 346 347 349 352 356 358 361 364 400 405 427 433 445 448 465 525 534 535 547 571 580 619 634 676 703 721 730 751 754 757
ST A T C C C A C G G G A A G T A C G A A A C T G A T G T G C G T A C G T A A T G G G A T C G
S01 A T C C C A C G G G A A G T A C G A A A C T G A T G T G C G T A C G T A A T G G G A T C N
S02 A T Y C C A C G G G A A G T A C G A A A C T G A T G T G C G T A C G T A A T G K G A T C N
S03 A T Y C C A C G G G A A G T A C G A A A C T G A T G T G C G T A C G T A A T G G G A T C N
S04 A T Y C C A C G G G A G G T A C G A A G C T G A T G T G C G T A C G T A A T G K G A T C N
S05 A T C C C A C G G G A A G T A C G A A A C T G A T G T G C G T A C G T A A T G G G A T C N
S06 A T C C C A C G G G A A G T A C G A A A C T G A T G T G C G T A C G T A A T G G G A T C N
S07 A T C C C A C G G G A A G T A C G A A A C T G A T G T G C G T A C G T A A T G G G A T C N
S08 A T C C C A C G G G A G G T A C G A A G C T A A T G T G G G T A C G T A A T G G G A T C N
S09 A T C C C A C G G G A G G T A C G A A G C T A A T G T G G G T A C G T A A T G G G A T C N
S10 A T C C C A C G G G A G G T A C G A A G C T A A T G T G G G T A C G T A A T G G G A T C N
S11 A T C C C A C G G G A G G T A C G A A G C T G A T G T G C G T A C G T A A T G G G A T C N
S12 A T Y C C A C G G G A G G T A C G A A G C T G A T G T G C G T A C G T A A T G G G A T C N
S13 A T C C C A C G G G A G G T A C G A A G C T G A T G T G C G T A C G T A A T G G G A T C N
S14 A T C C C A C G G G A G G T A C G A A G C T A A T G T G G G T A C G T A A T G G G A T C N
S15 A T C C C A C G G G A G G T A C G A A G C T A A T G T G G G T A C G T A A T G G G A T C N
S16 A T C C C A C G G G A G G T A C G A A G C T A A T G T G G G T A C G T A A T G G G A T C N
S17 A T Y C C A C G G G A G G T A C G A A G C T G A T G T G C G T A C G T A A T G G G A T C N
S18 A T Y C C A C G G G A G G T A C G A A G C T G A T G T G C G T A C G T A A T G G G A T C N
S19 　 T Y C C A C G G G A A G T A C G A A A C T G A T G T G C G T A C G T A A T G G G A T C N
S20 A T Y C C A C G G G A G G T A C G A A G C T A A T G T G G G T A C G T A A T G G G A T C N
S21 A T Y C C A C G G G A G G T A C G A A G C T A A T G T G G G T A C G T A A T G G G A T C N
S22 A T Y C C A C G G G A G G T A C G A A G C T A A T G T G G G T A C G T A A T G G G A T C N
S23 A T Y C C A C G G G A G G T A C G A A G C T G A T G T G C G T A C G T A A T G K G A T C N
S24 A T C C C A C G G G A G G T A C G A A G C T G A T G T G C G T A C G T A A T G G G A T C N
S25 A T C C C A C G G G A G G T A C G A A G C T A A T G T G G G T A C G T A A T G G G A T C N
S26 A T C C C A C G G G A G G T A C G A A G C T G A T G T G C G T A C G T A A T G G G A T C N
S27 A T C C C A C G G G A G G T A C G A A G C T G A T G T G C G T A C G T A A T G G G A T C N
S28 A T C C C A C G G G A G G T A C G A A G C T G A T G T G C G T A C G T A A T G G G A T C N
S29 A T C C C A C G G G A G G T A C G A A G C T G A T G T G C G T A C G T A A T G G G A T C N
S30 A T C C C A C G G G A G G T A C G A A G C T A A T G T G G G T A C G T A A T G G G A T C N
S31 A T C C C A C G G G A G C T A C G A A G C T A A T G T G G G T A C G T A A T G G G A T C N
S32 A T C C C A C G G G A G C T A C G A A G C T A A T G T G G G T A C G T A A T G G G A T C N
S33 C G C C T G T A G G G G G C C C G G A G T C G G C C C G C G C G G C G G G C A G G G A T A
S34 C G C C T G T A G G G G G C C C G G A G T C G G C C C G C G C G G C G G G C A G G G A T A
S35 C G C C T G T A G G G G G C C C G G A G C C G G C C C G C G C G G C G G G C A G G G A T A
S36 C G C C T G T A G G G G G C C C G G A G C C G G C C C G C G C G G C G G G C A G G G A T A
S37 C G C T T G T A G G G G G C C C G G A G C C G G C C C G C G C G G C G G G C A G G G A T A
S38 C G C C T G C A A G G G G C C A A G G G C C G G C C C A C G C G G C G G G C G G G G A T A
S39 C G C C T G C A A G G G G C C C G G A G C C G G C C C A C G C G G C G G G C G G G G A T A
S40 　 G Y C T 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　 　

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