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P019 で見つかったSNPs

カラムの上の番号は標準配列(ST)の予想PCR産物での位置を表す。 色を塗った箇所が標準配列と違う塩基を示す。 赤はGATCいずれかに固定しているもの、 ピンクは1塩基に固定していないもの、 灰色はシークエンスがきれいに読めずNだったものを表す。

Strain 84 90 116 155 159 169 193 204 210 246 279 300 303 359 418 444 450 492 502 518 531 559 563 596 608 618 637 657 669 675 676 690 696 720 723 726 733 735
ST A G C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A G C T G A
S01 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S02 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S03 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S04 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S05 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S06 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S07 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S08 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S09 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S10 G N C C C T A T G G G A C T G A A A C A T C A A G G G G G C G G A N C W G A
S11 G N C C C T A T G G G A C T G A A A C A T C A A G G G G G C G G A N C W G A
S12 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S13 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S14 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S15 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S16 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S17 G N C C C T A T G G G A C T G A A A C A T C A A G G G G G C G G A N C W G A
S18 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S19 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S20 A N C T C T A T G G G G C C A G A A C C T C A A G G G G G T G G A N C W G A
S21 G N C C C T A T G G G A C T G A A A C A T C A A G G G G G C G G A N C W G A
S22 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S23 G N C C C T A T G G G A C T G A A A C A T C A A G G G G G C G G A N C W G A
S24 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S25 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S26 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S27 A N C T C T A T G G G G C C A G A A C C T C A A G G G G G T G G A N C W G A
S28 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S29 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S30 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S31 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S32 A N C T C T A T G G G G C C A G A A C A T C A A G G G G G T G G A N C W G A
S33 A T T T T C A C A A G T C T G G C A T A C G G A A C C C G C T A C N T A T T
S34 A T C T T C A C A A G G C T G G C A T A C G G A A C C C G C T A C N T C T T
S35 A T C T T C A C A A G G C T G G C A T A C G G A A C C C G C T A C N T C T T
S36 A T C T T C A C A A G T C T G G C A T A C G G A G C C C G C T A C N T C T T
S37 A T C T T C T C A A G C G T G G C G T A C G G A G C C C C C T A C N C C T T
S38 A T C T T C T C A A A T C T G G C A T A C G G A G C C C A C T A C C T C T T
S39 A T C T T C T C A A A T C T G G C A T A C G G A G C C C A C T A C C T C T T
S40 A T C T T C T C A A G T C T G G C A T A C G G G G C C C G C T A C N C C T T

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