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SNPs found in the position P038

The numbers in the top row is the position in the expected PCR fragment amplified in silico from the publicly available D. melanogaster genome sequence (ST). You can see it by clicking each gene symbol in the previous table. Colored cells show nucleotides different from the ST sequence. Red: fixed SNPs (G, A, T or C) for each strain. Pink: polymorphic SNPs. Gray: Not determined (N).

Strain 78 88 97 98 100 106 112 129 140 142 190 200 248 264 290 308 356 380 396 409 423 458 459 507 513 521 522 530 596 617 626 646 650 659 675 682 709 729 743 757
ST A C A T T A T T A T T C C C T A T G A T T A G A T G T C G C T A A C G A G G C T
S01 A C A T T A T T A T T C C C T A T G A T T A G A T G T C G C T A A C G A G G C T
S02 A C A T T A T T A T T C C C T A T G A T T A G A T G T C G C T A A C G A G G C T
S03 A C A T T A T T A T T C C C T A T G A T T A G A T G T C G C T A A C G A G G C T
S04 A C A T T A T T A T T T C C T A T G A T T A G A T G T C G C T A A C G A G G C T
S05 A C A T T A T T A T T T C C T A T G A T T A G A T G T C G C T A A C G A G G C T
S06 A C A T T A T T A T T C C C T A T G A T T A G A T G T C G C T A A C G A G G C T
S07 A C A T T A T T A T T C C C T A T G A T T A G A T G T C G C T A A C G A G G C T
S08             T T A T                                                            
S09 A C A T T A T T A T T T C C T A T G A T T A G A T G T C G C T A A C G A G G C  
S10 A C A T T A T T A T T T C C T A T G A T T A G A T G T C G C T A A C G A G G C W
S11 A C A T T A T T A T T T C C T A T G A T T A G A T G T C G C T A A C G A G G C T
S12 A C A T T A T T A T T T C C T A T G A T T A G A T G T C G C T A A C G M G G C T
S13 A C A T T A T T A T T C C C T A T G A T T A G A T G T C G C T A A C G A G G C T
S14 A C A T T A T T A T T T C C T A T G A T T A G A T G T C G C T A A C G A G G C T
S15 A C A T T A T T A T T C C C T A T G A T T A G A T G T C G C T A A C G A G G C W
S16 A C A T T A T T A T T T C C T A T G A T T A G A T G T C G C T A A C G A G G C W
S17 A C A T T A T T A T T C C C T A T G A T T A G A T G T C G C T A A C G A G G C W
S18 A C A T T A T T A T T Y C C T A T G A T T A G A T G T C G C T A A C G A G G C W
S19 A C A T T A T T A T T T C C T A T G A T T A G A T G T C G C T A A C G A G G C W
S20 A C A T T A T T A T T T C C T A T G A T T A G A T G T C G C T A A C G A G G C W
S21 A C A T T A T T A T T C C C T A T G A T T A G A T G T C G C T A A C G A G G C W
S22 A C A T T A T T A T T T C C T A T G A T T A G A T G T C G C T A A C G A G G C W
S23 A C A T T A T T A T T C C C T A T G A T T A G A T G T C G C T A A C G A G G C W
S24 A C A T T A T T A T T C C C T A T G A T T A G A T G T C G C T A A C G A G G C W
S25 A C A T T A T T A T T T C C T A T G A T T A G A T G T C G C T A A C G A G G C W
S26 A C A T T A T T A T T C C C T A T G A T T A G A T G T C G C T A A C G A G G C W
S27 A C A T T A T T A T T C C C T A T G A T T A G A T G T C G C T A A C G A G G C W
S28 A C A T T A T T A T T C C C T A T G A T T A G A T G T C G C T A A C G A G G C W
S29 A C A T T A T T A T T T C C T A T G A T T A G A T G T C G C T A A C G N G G C W
S30 A C A T T A T T A T T C C C T A T G A T T A G A T G T C G C T A A C G A G G C W
S31 A C A T T A T T A T T C C C T A T G A T T A G A T G T C G C T A A C G A G G C W
S32 A C A T T A T T A T T C C C T A T G A T T A G A T G T C G C T A A C G A G G C  
S33 G S G C C A C C T T C C G A C G G T C C T G A T T A C C A T G G G T A A G T W T
S34 N S G C C A C C T T C C G A C G G T C C T G A T T A C C A T G G G T A A G T W T
S35                                                                                
S36 N S G C C A C C T T C C G A C G G T C C T G A T T A C C A T G G G T A A G Y W T
S37 G C G C C A C C T T C C G A C G G T C C T G A T G A C C A T G G G T A A G T T T
S38 G C G T C A C C T T C C G A T G G T C C T G A T T A C T A T G G G T A A G T W T
S39 G C G T C A C C T T C C G A T G G T C C T G A T T A C T A T G G G T A A G T W T
S40 S C G T N A C C T A C C G A T G G T C C T G A T T A C C A T G G G T A A A T    

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