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SNPs found in the position P048

The numbers in the top row is the position in the expected PCR fragment amplified in silico from the publicly available D. melanogaster genome sequence (ST). You can see it by clicking each gene symbol in the previous table. Colored cells show nucleotides different from the ST sequence. Red: fixed SNPs (G, A, T or C) for each strain. Pink: polymorphic SNPs. Gray: Not determined (N).

Strain 56 70 71 74 79 110 111 114 117 144 156 162 189 232 261 262 273 278 282 309 358 360 375 377 399 405 411 420 438 474 482 485 488 493 517 519 528 547 555 558 564 567 576 589 612 624 639 645 656 672 675 678 686 696 713 776
ST C G G C C G T G T G C G G G G G A C G C C C T G G A G G T T C C C T G G G G C A G T A C A A T C C A G T C C G G
S01 C G T C C G T G C G C G G G G G A C S C C C T G G A G G T T C C C T G G G G T A A C G C A A T C Y A G T C C R G
S02 C G T C C G T G C G C B G V G G A C B C C C T K G R G G T T S Y C T K G G R T A A C S C A R D C Y A G T C C G G
S03 C A G C C A A A C G G B A G G N G N G C C C T N G R G G T T N N C T G G N G C A G C G C A W N C N A G T C C G G
S04 C G T C C G T G C G C B G V S S A S B C C C T K G R G G T T S Y C T K G G R T A A C S C A R D C Y A G T C C G G
S05 C G T C C G T G C G C G G G G G A C G C C C T G G A G G T T C C C T G G G G T A A C G C A A T C C A G T C C G G
S06                                                                                                               S
S07   G T C C G T G C G C G G G G G A C G C C C T G G A G G T T C C C T G G G G T A A C G C A A T C C A G T C C G G
S08       Y Y A W A C G G S R G G G R S G C C C T G G A G G T T C C C T N G N G Y A R C G C A A T C C A G T C C G G
S09 C G T C C G T G C G C B G V G G A C B C C C T K G R G G T T S Y C T K G G R T A A C S C A R D C Y A G T C C G G
S10 C G T C C G T G C G C G G G G G A C G C C C T G G A G G T T C C C T G G G G T A A C G C A A T C C A G T C C G G
S11 C G T C C G T G C G C G G G G G G C G C C C T G G A G G T T C C C T G G G G C A G C G C A A T C C A G T C C G G
S12 C G T C C G T G C G C G G G G G A C G C C C T G G A G G T T C C C T G G G G T A A C G C A A T C C A G T C C G G
S13 C G N C C G T G C G C G G G G G A C G C C C T G G A G G T T C C C T G G G G T A A C G C A A T C C A G T C C G G
S14 C G T C C G T G C G C G G G G G G C G C C C T G G A G G T T C C C T G G G G C A G C G C A A T C C A G T C C G G
S15   G T C C G T G C G C G G G G G A C G C C C T G G A G G T T C C C T G G G G T A A C G C A A T C C A G T C C G G
S16   G T C C G T G C G C G G G G G A C G C C C T G G A G G T T C C C T G G G G T A A C G C A A T C C A G T C C G G
S17 N G T C C G T G C G C G G G G G G C G C C C T G G A G G T T S Y C T G G G G C A G C G C A A N C Y A G T C C R G
S18   R N C C R W R C G S G R G G G R C G C C C T G G A G G T T C C C T G G G G Y A R C G C A A T C C A G T C C G G
S19 C G T C C G T G C G C G G G G G A C G C C C T G G A G G T T C C C T G G G G T A A C G C A A T C C A G T C C G G
S20 N G T C C G T G C G C G G G G G G C G C C C T G G A G G T T C C C T G G G G C A G C G C A A T C C A G T C C G G
S21 C G T C C G T G C G C G G G G G A C G C C C T G G A G G T T C C C T G G G G T A A C G C A A T C C A G T C C G G
S22 C G T C C G T G C G C S G G G G A C G C C C T G G A G G T T C C C T G G G G C A G C G C A A T C Y A G T C C G G
S23 C G T C C G T G C G C B G R G G A C B C C C T N G R G G T T S Y C T K G G R T A A C G C A R T C Y A G T C C R G
S24 C G T C C G T G C G C G G G G G A C G C C C T G G A G G T T C C C T G G G G T A A C G C A A T C C A G T C C G G
S25   G G C C G T G C G C K G S T N A C K C C C T K G R G G T T S Y C T K G G R T A A C S C A R D Y Y A G D C C S G
S26 C G G C C G T G N G C K G S G G A C B C C C T K G R G G T T S Y C T K G G R C A G Y R C A R W C Y A G W M M N  
S27   A G C Y A A A C G G K A S G G G C K C C C T G G R G G T T S Y C T K G G R C A G C G C A D D C Y A G T C C G G
S28 N G T C C G T G C G C G G G G G G C G C C C T G G A G G T T C Y C T G G G G C A G C G C A A T C C A G T C C G G
S29 C G T C C G T G C G C B G R G G G C K C C C T G G A G G T T S Y C T K G G R C A G C G C A R W C Y A G T C C R G
S30 C G T C C G T G C G C G G G G G A C G C C C T G G A G G T T C C C T G G G G T A A C G C A A T C C A G T C C G G
S31 C G T C C G T G C G C B G R G G A C S C C C T K G R G G T T S Y C T G G G R T A A C S C A A T C Y A G T C C R G
S32                                                                                                   R G K Y      
S33                         G S G S G Y S C                                                           W K N C R S  
S34 C G G G G G T A A G C G G G G G G C G C C C A G A A T G C G C C C T G A G G C G G C G G G A T C C A T G C C G G
S35   G G G G G T A A G C S G G G S G B S C C C A K A R T G C G S Y C T K A G R C G G C S G G R W C Y A K G C C G  
S36   G G C K G T A A G C S G G G G G C K C C C T G G A T G T G N Y C T G G C R C A G C N G G G T N Y A T A C C G A
S37   G G C Y G T A C G C B G V G G G B S C C R A K G S T G T G S Y C T K G G R C G G C S G G R D C Y A G G C A V G
S38   G G C C G T A C A C M G G G G G C S C C C A G G R T T T G C Y T G G A G R C G G C G G G A N N Y A G G C C G G
S39 C G G C C G T A C A C M G G G G G C G C C C A G G A T T T G C C T G G A G G C G G C G G G A N N C A G G C C G G
S40                                       C S N A N N A T N T                                                      

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