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SNPs found in the position P080

The numbers in the top row is the position in the expected PCR fragment amplified in silico from the publicly available D. melanogaster genome sequence (ST). You can see it by clicking each gene symbol in the previous table. Colored cells show nucleotides different from the ST sequence. Red: fixed SNPs (G, A, T or C) for each strain. Pink: polymorphic SNPs. Gray: Not determined (N).

Strain 73 79 91 94 96 151 153 154 166 172 175 190 236 244 250 256 274 286 309 310 322 334 343 351 352 391 399 402 403 440 493 496 508 526 529 535 538 541 553 577 595 596 607 619 625 634 640 658 664 671 682 691 706
ST C T A C A T T C A G C A G T A C T T C C A T C T T T C G C C T G T T T T T C C A G G T G A G T C A A G T C
S01 C T A S A T T C A G C A G T A C T T C C A T C T T T C G C C T G T T T T T C C A G G T G A G T C A A G T C
S02 C T A S A T T C A G C A G T A C T T C C A T C T T K C G C C T G T T T T T C C A G K T G A G T C A A G T C
S03 C T A S A T T C A G C A G T A C T T C C A T C T T G C G C C T G T T T T T C C A G T T G A G T C A A G T C
S04 C T A S A T T C A G C A G T A C T T C C A T C T T G C G T C T G T T T T T C C A G G T G A G T C A A G T C
S05 C T A S A T T C A G C A G T A C T T C C A T C T T G C G T C T G T T T T T C C A G G T G A G T C A A G T C
S06 C T A S A T T C A G C A G T A C T T C C A T C T T G C G C C T G T T T T T C C A G G T G A G T C A A G T C
S07 C T A S A T T C A G C A G T A C T T C C A T C T T K C G Y C T G T T T T T C C A G G T G A G T C A A G T C
S08   T A S A T T C A G C A G T A C T T C C A T C T T T C G C C T G T T T T T C C A G G T G A G T C A A G T C
S09 C T A S A T T C A G C A G T A C T T C C A T C T T G C G T C T G T T T T T C C A G G T G A G T C A A G T C
S10   T A S A K K C A G C A G T A C T T C C A T C T T G C G T C T G T T T T T C C A G G T G A G T C A A G T C
S11 C T N N N N T Y A G N N G T W C T T C C W T C T T G C G T C T G T T T T T C C A G G T G A G T C A A G T C
S12 C T N N N N T Y A G N N G T W C T T C C W T C T T G Y K T C T G T T T T T C C A G G T G A G T C A A G T C
S13   T A S A K K C A G C A G T A C T T C C A T C T T G C G T C T G T T T T T C C A G G T G A G T C A A G T C
S14 C T N N N K T C A G C A G T A C T T C C A T C T T G C G T C T G T T T T T C C A G G T G A G T C A A G T C
S15 C T A S A T K C A R C A G T A C W T S C A T C T T G C G T C T G W W T T T C C A G G T G A G T C A A N K Y
S16 C T A S A T T C A G C A G T A C T T C C A T C T T G C G T C T G T T T T T C C A G G T G A G T C A A G T C
S17 C T A S G T T C A G C A G T A C T T C C A T C T T G C G C C T G T T T T T C C A G G T G A G T C A A G T C
S18 C T A S A T T C A G C A G T A C T T C C A T C T T K C G C C T G T T T T T C C A G G T G A G T C A A G T C
S19 C T A S A T T C A G C A G T A C T T C C A T C T T T C G C C T G T T T T T C C A G G T G A G T C A A G T C
S20 C T A S A T T C A G C A G T A C T T C C A T C T T G C G T C T G T T T T T C C A G G T G A G T C A A G T C
S21 C T A S A T T C A G C A G T A C T T C C A T C T T T C G C C T G T T T T T C C A G G T G A G T C A A G T C
S22 C T A S A T T C A G C A G T A C T T C C A T C T T G C G C C T G T T T T T C C A G G T G A G T C A A G T C
S23 C T A S A T T C A G C A G T A C T T C C A T C T T G C G T C T G T T T T T C C A G G T G A G T C A A G T C
S24 C T A S A T T C A G C A G T A C T T C C A T C T T G C G C C T G T T T T T C C A G G T G A G T C A A G T C
S25 C T A S A T T C A G C A G T A C T T C C A T C T T T C G C C T G T T T T T C C A G G T G A G T C A A G T C
S26 C T A S A T T C A G C A G T A C T T C C A T C T T T C G C C T G T T T T T C C A G G T G A G T C A A G T C
S27 C T A S A T T C A G C A G T A C T T C C A T C T T G C G T C T G T T T T T C C A G G T G A G T C A A G T C
S28 C T A S A T T C A G C A G T A C T T C C A T C T T T C G C C T G T T T T T C C A G G T G A G T C A A G T C
S29 C T A S A T T C A G C A G T A C T T C C A T C T T T C G C C T G T T T T T C C A G G T G A A T C A A G T C
S30 C T A S A T T C A G C A G T A C T T C C A T C T T G C G T C T G T T T T T C C A G G T G A G T C A A G T C
S31 C T A S A T T C A G C A G T A C T T C C A T C T T T C G C C T G T T T T T C C A G G T G A A T C A A G T C
S32 C T A S A T T C A G C A G T A C T T C C A T C T T G C G T C T G T T T T T C C A G G T G A G T C A A G T C
S33 A T G S A C T C C G C G G A A T T T G G A T C T C G C G T C T G C C C C C T G G G G C A A G C C T C T C C
S34 A V G S A C T C C G A G G A A T T T G G A T C T C G C G T C T G C T T C C T C G G G C G T G C C T C T C C
S35 A V G S A C T A C G C G G A A T T T C C A A T C C G C G T C T G C C C C C T C G C G C A A G T C T C T C C
S36 A V G S A C T C C G A G G A A T T T G G A T C T C G C G T C T G C T T C C T C G G G C G T G C C T C T C C
S37 A T G N A C T C C G C G G A A T C A C C A A T T C G C G T C T G C C C C C T C G G G C G A G C C T C T C C
S38 A R G N N S T Y N G N G A A A T T A C C A A T C C G C G T C T T C C C C C T C G G G C G A G N C T C T C C
S39 A R G N N S T Y N G N G A A A T T A C C A A T C C G C D T C T T C C C C C T C G G G C G A G N C T C T C C
S40 A V G A A C C C C T C G G A T C T T C C T A T T C G C B T C C G C T T C N T C G G G C G A G C C T C T C C

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