Drosophila Genetic Resource Center
DGRC - Drosophila Stocks at Drosophila Genetic Resource Center -DGRC - Drosophila Genetic Resource Center, Kyoto Institute of Technology - KYOTO Stock CenterDGRC - Drosophila Genetic Resource Center, Kyoto Institute of Technology - KYOTO Stock Center
Home Home
 
Back to Young genes with mutant or insertion stocks
  Branch 5: Young genes with mutant or insertion stocks

 

Branch Gene No. CG Number Gene Symbol Gene Full Name Chromosome Arm Expression Research Paper
5 61 CG8234 Tret1-2 Trehalose transporter 1-2   2R Salivary gland, Hindgut, Fat body, Testis, Virgin spermatheca, Mated spermatheca, Adult carcass, Larval fat body
Zhan et al., 2011, Gene 470(1-2): 1--6Evolution of alternative splicing in newly evolved genes of Drosophila. [FBrf0212278]
Kanamori et al., 2010, Insect Biochem. Mol. Biol. 40(1): 30--37The trehalose transporter 1 gene sequence is conserved in insects and encodes proteins with different kinetic properties involved in trehalose import into peripheral tissues. [FBrf0210033]
Dworkin and Jones, 2009, Genetics 181(2): 721--736Genetic Changes Accompanying the Evolution of Host Specialization in Drosophila sechellia. [FBrf0207106]
Kadam et al., 2009, Development 136(5): 739--747FGF ligands in Drosophila have distinct activities required to support cell migration and differentiation. [FBrf0206790]
Reynolds et al., 2008, PLoS ONE 3(8): e2918Identifying determinants of cullin binding specificity among the three functionally different Drosophila melanogaster Roc proteins via domain swapping. [FBrf0205823]
Stathopoulos et al., 2004, Genes Dev. 18(6): 687--699pyramus and thisbe: fGF genes that pattern the mesoderm of Drosophila embryos. [FBrf0174649]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Kyoto DGRC 141156 y[*] w[*]; P{ry[+t7.2]=neoFRT}40A P{w[+mW.hs]=FRT(w[hs])}G13 cn[1] PBac{SAstopDsRed}LL03974 bw[1] / CyO, S[*] bw[1]
VDRC v40980 w[1118]; P{GD3501}v40980/TM3
VDRC v49889 w[1118]; P{GD17847}v49889
5 62 CG10476 CG10476   2R *
Riedl et al., 2007, Fly 1(1): 23--32Genetic and behavioral analysis of natural variation in Drosophila melanogaster pupation position. [FBrf0200063]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
BDSC 18385 w[1118]; PBac{w[+mC]=WH}CG11906[f00885]
Exelixis at Harvard Medical School - PBac{WH}CG11906[f00885]
FBrf0208510 - CG10476[KK115852]
5 63 CG33667 CG33667   X -
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Exelixis at Harvard Medical School - PBac{WH}CG42340[f02918]
5 64 CG33669 CG33669   X -
Andrews et al., 2000, Genome Res. 10(12): 2030--2043Gene discovery using computational and microarray analysis of transcription in the Drosophila melanogaster testis. [FBrf0132348]
5 65 CG30374 CR30374   2R Midgut, Larval midgut, Larval fat body
Djiane and Mlodzik, 2010, PLoS ONE 5(6): e11228The Drosophila GIPC homologue can modulate myosin based processes and planar cell polarity but is not essential for development. [FBrf0211141]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Kyoto DGRC 103596 y[*] w[*]; P{w[+mW.hs]=GawB}kermit[NP0358] / CyO, P{w[-]=UAS-lacZ.UW14}UW14
VDRC v100491 P{KK104488}VIE-260B
FBrf0202579 - CR30374[GD10058]
5 66 CG13793 CG13793   2L Head, Hindgut, Heart, Fat body, Adult carcass
Miller et al., 2008, Insect Biochem. Mol. Biol. 38(10): 923--931The invertebrate B(0) system transporter, D. melanogaster NAT1, has unique d-amino acid affinity and mediates gut and brain functions. [FBrf0206657]
Romero-Calderon et al., 2007, Dev. Neurobiol. 67(5): 550--569A screen for neurotransmitter transporters expressed in the visual system of Drosophila melanogaster identifies three novel genes. [FBrf0200993]
Thimgan et al., 2006, J. Exp. Biol. 209(Pt 17): 3383--3404Comparative sequence analysis and tissue localization of members of the SLC6 family of transporters in adult Drosophila melanogaster. [FBrf0193583]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
BDSC 18444 w[1118]; PBac{w[+mC]=WH}CG13793[f01503]
BDSC 24204 w[1118]; Mi{ET1}CG13793[MB04609]
VDRC v3668 w[1118]; P{GD973}v3668/CyO
VDRC v3669 w[1118]; P{GD973}v3669
VDRC v50167 w[1118]; P{GD16550}v50167
VDRC v52656 w[1118]; P{GD16550}v52656
Exelixis at Harvard Medical School - PBac{WH}CG13793[f01503]
5 67 CG6999 CG6999   X *
Fan et al., 2008, Mol. Biol. Evol. 25(7): 1451--1458Recurrent tandem gene duplication gave rise to functionally divergent genes in Drosophila. [FBrf0205377]
McIntyre et al., 2006, Genome Biol. 7(8): R79Sex-specific expression of alternative transcripts in Drosophila. [FBrf0192874]
Thornton and Long, 2005, Mol. Biol. Evol. 22(2): 273--284Excess of Amino Acid Substitutions Relative to Polymorphism Between X-Linked Duplications in Drosophila melanogaster. [FBrf0180520]
Park et al., 2004, Proc. Natl. Acad. Sci. U.S.A. 101(45): 15974--15979Identification of alternative splicing regulators by RNA interference in Drosophila. [FBrf0180650]
Dimova et al., 2003, Genes Dev. 17(18): 2308--2320Cell cycle-dependent and cell cycle-independent control of transcription by the Drosophila E2F/RB pathway. [FBrf0162136]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
NIG-Fly 6999R-1 CG6999[NIG.6999R]
NIG-Fly 6999R-3 CG6999[NIG.6999R]
BDSC 10881 w[1118] PBac{w[+mC]=PB}c02279 CG32706
Exelixis at Harvard Medical School - PBac{PB}c02279 CG32706
FBrf0208510 - CG6999[KK116278]
5 68 CG11466 Cyp9f2 Cyp9f2   3R Brain, Head, Eye, Thoracicoabdominal ganglion, Salivary gland, Crop, Midgut, Tubule, Hindgut, Heart, Fat body, Virgin spermatheca, Adult carcass, Larval midgut, Larval tubule, Larval hindgut
Wang et al., 2012, Arch. Insect Biochem. Physiol. 79(4-5): 264--275THE INVOLVEMENT OF CYTOCHROME P450 MONOOXYGENASES IN METHANOL ELIMINATION IN Drosophila melanogaster LARVAE. [FBrf0218094]
Zhou et al., 2012, PLoS Genet. 8(3): e1002593Phenotypic plasticity of the Drosophila transcriptome. [FBrf0217974]
Niwa et al., 2011, Appl. Ent. Zool. 46(4): 533--543Expressions of the cytochrome P450 monooxygenase gene Cyp4g1 and its homolog in the prothoracic glands of the fruit fly Drosophila melanogaster (Diptera: Drosophilidae) and the silkworm Bombyx mori (Lepidoptera: Bombycidae). [FBrf0216541]
Zhan et al., 2011, Gene 470(1-2): 1--6Evolution of alternative splicing in newly evolved genes of Drosophila. [FBrf0212278]
Blanco et al., 2010, BMC Dev. Biol. 10: 94Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812]
Chen et al., 2010, Science 330(6011): 1682--1685New genes in Drosophila quickly become essential. [FBrf0212650]
Giraudo et al., 2010, Pestic. Biochem. Physiol. 97(2): 115--122Regulation of cytochrome P450 expression in Drosophila: Genomic insights. [FBrf0211123]
Mosallanejad et al., 2010, J. Insect Physiol. 56(12): 1973--1985Ecdysone signaling and transcript signature in Drosophila cells resistant against methoxyfenozide. [FBrf0212166]
Parisi et al., 2010, BMC Genomics 11: 346Germline-dependent gene expression in distant non-gonadal somatic tissues of Drosophila. [FBrf0211065] etc
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
NIG-Fly 11466R-3 Cyp9f2[NIG.11466R]
NIG-Fly 11466R-4 Cyp9f2[NIG.11466R]
BDSC 10938 w[1118]; PBac{w[+mC]=PB}CG34402[c02594] CG34402
BDSC 17986 w[1118]; PBac{w[+mC]=RB}Cyp9f2[e01795]
BDSC 18474 w[1118]; PBac{w[+mC]=WH}Cyp9f2[f01799]
VDRC v106779 P{KK108846}VIE-260B
VDRC v38044 w[1118]; P{GD5631}v38044
VDRC v38045 w[1118] P{GD5631}v38045
Exelixis at Harvard Medical School - PBac{RB}Cyp9f2[e01795]
Exelixis at Harvard Medical School - PBac{WH}Cyp9f2[f01799]
Exelixis at Harvard Medical School - PBac{PB}CG34402[c02594] CG34402
5 69 CG34332 CG34332   X -
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
BDSC 21419 y[1] w[67c23] P{w[+mC] y[+mDint2]=EPgy2}EY13463
5 70 CG9807 Rab9Db Rab at 9Db   X *
Uytterhoeven et al., 2011, Cell 145(1): 117--132Loss of skywalker reveals synaptic endosomes as sorting stations for synaptic vesicle proteins. [FBrf0213384]
Hutter, 2007, Adv. Genet. 58: 1--23Rapidly evolving Rab GTPase paralogs and reproductive isolation in Drosophila. [FBrf0199126]
Zhang et al., 2007, Genetics 176(2): 1307--1322Thirty-one flavors of Drosophila Rab proteins. [FBrf0201049]
Barbash et al., 2003, Proc. Natl. Acad. Sci. U.S.A. 100(9): 5302--5307A rapidly evolving MYB-related protein causes species isolation in Drosophila. [FBrf0159301]
Hutter, 2002, Dev. Genes Evol. 212(10): 504--512X-linked small GTPase and OXPHOS genes are candidates for the genetic basis of hybrid inviability in Drosophila. [FBrf0151909]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
NIG-Fly 9807R-1 Rab9Db[NIG.9807R]
NIG-Fly 9807R-2 Rab9Db[NIG.9807R]
BDSC 9835 y[1] w[*]; P{w[+mC]=UASp-YFP.CG9807.D67L}jigr1[14b]
BDSC 9836 y[1] w[*]; P{w[+mC]=UASp-YFP.CG9807}Indy[25]
BDSC 23233 y[1] P{w[+mC]=UASp-YFP.CG9807}21 w[*]/SM5
BDSC 23256 y[1] w[*]; P{w[+mC]=UASp-YFP.CG9807.D67L}mus209[04]/SM5
BDSC 23257 y[1] w[*]; P{w[+mC]=UAST-YFP.CG9807.T21N}Pex13[01]
BDSC 23258 y[1] w[*]; P{w[+mC]=UAST-YFP.CG9807.T21N}03/TM3, Sb[1]
FBrf0208510 Rab9Db[KK115517]
FBrf0208510 Rab9Db[KK116154]
5 71 CG15635 CG15635   2L Male accessory glands
Cornman, 2010, PLoS ONE 5(9): e12536The Distribution of GYR- and YLP-Like Motifs in Drosophila Suggests a General Role in Cuticle Assembly and Other Protein-Protein Interactions. [FBrf0211774]
Buch et al., 2008, Cell Metab. 7(4): 321--332Opposing effects of dietary protein and sugar regulate a transcriptional target of Drosophila insulin-like peptide signaling. [FBrf0204261]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
NIG-Fly 15635R-1 CG15635[NIG.15635R]
NIG-Fly 15635R-3 CG15635[NIG.15635R]
BDSC 19129 w[1118]; PBac{w[+mC]=WH}CG15635[f08079]
BDSC 36234 y[1] w[*]; Mi{y[+mDint2]=MIC}CG15635[MI03403]
VDRC v46490 w[1118]; P{GD17049}v46490
VDRC v46491 w[1118]; P{GD17049}v46491
Exelixis at Harvard Medical School - PBac{WH}CG15635[f08079]
Exelixis at Harvard Medical School - PBac{WH}f08080a, PBac{WH}CG15635[f08080b]
5 72 CG12224 CG12224   3R Midgut, Tubule, Heart, Fat body, Virgin spermatheca, Mated spermatheca, Adult carcass, Larval fat body
Chen et al., 2010, Science 330(6011): 1682--1685New genes in Drosophila quickly become essential. [FBrf0212650]
Buchon et al., 2009, Cell Host Microbe 5(2): 200--211Drosophila intestinal response to bacterial infection: activation of host defense and stem cell proliferation. [FBrf0206694]
Beckstead et al., 2007, Insect Biochem. Mol. Biol. 37(6): 570--578Specific transcriptional responses to juvenile hormone and ecdysone in Drosophila. [FBrf0201760]
McGraw et al., 2004, Curr. Biol. 14(16): 1509--1514Genes regulated by mating, sperm, or seminal proteins in mated female Drosophila melanogaster. [FBrf0180059]
Pedra et al., 2004, Proc. Natl. Acad. Sci. U.S.A. 101(18): 7034--7039Genome-wide transcription profile of field- and laboratory-selected dichlorodiphenyltrichloroethane (DDT)-resistant Drosophila. [FBrf0175100]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Kyoto DGRC 103770 w[*]; P{w[+mW.hs]=GawB}CG18547[NP0806] / TM3, Ser[1] CG18547
BDSC 19216 w[1118]; P{w[+mC]=XP}CG18547[d05047] CG18547
BDSC 30150 w[1118]; P{w[+mC]=EP}G5295
BDSC 32619 w[1118]; P{w[+mC]=EP}CG18547[G8850] CG18547
BDSC 41445 y[1] w[*]; Mi{y[+mDint2]=MIC}CG12224[MI06362]
VDRC v102603 P{KK112159}VIE-260B
VDRC v31700 w[1118]; P{GD7535}v31700
Exelixis at Harvard Medical School - P{XP}d01594
Exelixis at Harvard Medical School - P{XP}d00888
Exelixis at Harvard Medical School - P{XP}CG18547[d05047] CG18547
5 73 CG1773 CG1773   2R Head, Heart, Fat body, Virgin spermatheca, Mated spermatheca, Adult carcass, Larval fat body
Zhan et al., 2011, Gene 470(1-2): 1--6Evolution of alternative splicing in newly evolved genes of Drosophila. [FBrf0212278]
Weake et al., 2008, EMBO J. 27(2): 394--405SAGA-mediated H2B deubiquitination controls the development of neuronal connectivity in the Drosophila visual system. [FBrf0204567]
Ross et al., 2003, Gene 304(1-2): 117--131Serine proteases and their homologs in the Drosophila melanogaster genome: an initial analysis of sequence conservation and phylogenetic relationships. [FBrf0155784]
Huet et al., 2002, Proc. Natl. Acad. Sci. U.S.A. 99(15): 9948--9953A deletion-generator compound element allows deletion saturation analysis for genomewide phenotypic annotation. [FBrf0151478]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
NIG-Fly 1773R-1 CG1773[NIG.1773R]
NIG-Fly 1773R-2 CG1773[NIG.1773R]
VDRC v38102 w[1118]; P{GD5777}v38102
VDRC v50333 w[1118]; P{GD17387}v50333
VDRC v50601 w[1118]; P{GD17387}v50601
FBrf0208510 - CG1773[KK115130]
5 74 CG12725 CG12725   X Testis
Langille and Clark, 2007, Genomics 90(3): 334--343Parent genes of retrotransposition-generated gene duplicates in Drosophila melanogaster have distinct expression profiles. [FBrf0200094]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
VDRC v103003 P{KK113069}VIE-260B
VDRC v32006 w[1118]; P{GD7808}v32006
VDRC v32007 w[1118]; P{GD7808}v32007/TM3
VDRC v49841 w[1118]; P{GD17735}v49841/TM3
Exelixis at Harvard Medical School - PBac{RB}e03642
5 75 CG32581 CG32581   X *
Dai et al., 2006, Gene 385: 96--102Retrogene movement within- and between-chromosomes in the evolution of Drosophila genomes. [FBrf0194437]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Kyoto DGRC 104566 y[*] w[*] P{w[+mW.hs]=GawB}NP4004 / FM7c
Kyoto DGRC 112368 w[*] P{w[+mW.hs]=GawB}NP0858 / FM7c
BDSC 22351 y[1] w[67c23] P{w[+mC] y[+mDint2]=EPgy2}EY20019 CG15602
BDSC 26598 w[*] P{w[+mC]=EP}G760
BDSC 32629 w[*] P{w[+mC]=EP}CG32581[G10126]
5 76 CG32071 CG32071   3L Salivary gland, Crop, Fat body, Mated spermatheca, Larval midgut, Larval carcass
Chertemps et al., 2005, Biochem. Biophys. Res. Commun. 333(4): 1066--1072A new elongase selectively expressed in Drosophila male reproductive system. [FBrf0188597]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Kyoto DGRC 203382 y[1] w[67c23]; P{w[+mC]=GSV6}GS11513/TM3, Sb[1] Ser[1]
BDSC 29142 w[1118]; Mi{ET1}CG32071[MB10652]
VDRC v103226 P{KK111589}VIE-260B
Exelixis at Harvard Medical School - PBac{PB}c06951b
FBrf0202579 - CG32071[GD2413]
5 77 CG10174 Ntf-2r Nuclear transport factor-2-related   2L Testis
D?az-Castillo and Ranz, 2012, Mol. Biol. Evol. 29(9): 2105--2108 Nuclear chromosome dynamics in the Drosophila male germ line contribute to the nonrandom genomic distribution of retrogenes. [FBrf0219274]
Zhan et al., 2011, Gene 470(1-2): 1--6Evolution of alternative splicing in newly evolved genes of Drosophila. [FBrf0212278]
Daines, Wang, et. al. 2011, Genome Res. 21 315--324The Drosophila melanogaster transcriptome by paired-end RNA sequencing. [FBrf0213064][pmid.21177959][doi.10.1101/gr.107854.110]
Tracy, R?o, et. al. 2010, Genetics 184 1067--1076 Convergently recruited nuclear transport retrogenes are male biased in expression and evolving under positive selection in Drosophila. [FBrf0210734][pmid.20065068][doi.10.1534/genetics.109.113522]
McElroy, McLean, et. al. 2008 Defects in nuclear transport enhance segregation distortion. Fly 2 280--290 paperYang et al., 2008, PLoS Genet. 4(1): e3Repetitive element-mediated recombination as a mechanism for new gene origination in Drosophila. [FBrf0202722]
Geng and MacDonald 2007 Identification of genes that influence gurken expression. Fly 1 259--267 paperLangille and Clark, 2007, Genomics 90(3): 334--343 Parent genes of retrotransposition-generated gene duplicates in Drosophila melanogaster have distinct expression profiles. [FBrf0200094]
Bai, Casola, et. al. 2007, Genome Biol. 8 R11Comparative genomics reveals a constant rate of origination and convergent acquisition of functional retrogenes in Drosophila. [FBrf0192134][pmid.17233920][doi.10.1186/gb-2007-8-1-r11]
Dai et al., 2006, Gene 385: 96--102Retrogene movement within- and between-chromosomes in the evolution of Drosophila genomes. [FBrf0194437]
Betran and Long 2003 Dntf-2r, a young Drosophila retroposed gene with specific male expression under positive darwinian selection. Genetics 164 977--988 paperBetran, Thornton, et. al. 2002 Retroposed new genes out of the X in Drosophila. Genome Res. 12 1854--1859 paper
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Kyoto DGRC 200040 y[1] w[67c23]; P{w[+mC]=GSV1}GS94 / SM1
NIG-Fly 10174R-3 Ntf-2r[NIG.10174R]
NIG-Fly 10174R-4 Ntf-2r[NIG.10174R]
BDSC 16658 y[1] w[67c23]; P{w[+mC] y[+mDint2]=EPgy2}Ntf-2r[EY05573]
BDSC 27553 y[1] v[1]; P{y[+t7.7] v[+t1.8]=TRiP.JF02705}attP2
VDRC v31195 w[1118]; P{GD6889}v31195
FBrf0205043 - Ntf-2r[KG00588]
FBrf0208510 - Ntf-2r[KK116168]
5 78 CG33926 CG33926   3L -
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
BDSC 17277 w[1118]; P{w[+mC]=EP}CG33926[EP3710]/TM6B, Tb[1]
VDRC v107542 P{KK112707}VIE-260B
FBrf0202579 CG33926[GD16348]
5 79 CG32825 Or19b Odorant receptor 19b   X Head, Midgut, Larval Salivary gland, S2 cells (growing)
Jafari et al., 2012, PLoS Biol. 10(3): e1001280Combinatorial activation and repression by seven transcription factors specify Drosophila odorant receptor expression. [FBrf0217822]
Endo et al., 2011, Nat. Neurosci. 15(2): 224--233Chromatin modification of Notch targets in olfactory receptor neuron diversification. [FBrf0217319]
Robertson, 2009, J. Insect Sci. 9: 18The insect chemoreceptor superfamily in Drosophila pseudoobscura: molecular evolution of ecologically-relevant genes over 25 million years. [FBrf0208421]
Zhou et al., 2009, PLoS Genet. 5(10): e1000681Plasticity of the chemoreceptor repertoire in Drosophila melanogaster. [FBrf0209112]
Guo and Kim, 2007, Mol. Biol. Evol. 24(5): 1198--1207Molecular evolution of Drosophila odorant receptor genes. [FBrf0202267]
Reiter et al., 2007, Fly 1(3): 164--171Accentuate the negative: proteome comparisons using the negative proteome database. [FBrf0200136]
van der Goes van Naters and Carlson, 2007, Curr. Biol. 17(7): 606--612Receptors and neurons for fly odors in Drosophila. [FBrf0192555]
Couto et al., 2005, Curr. Biol. 15(17): 1535--1547Molecular, anatomical, and functional organization of the Drosophila olfactory system. [FBrf0187305]
Robertson et al., 2003, Proc. Natl. Acad. Sci. U.S.A. 100(Supplement 2): 14537--14542Molecular evolution of the insect chemoreceptor gene superfamily in Drosophila melanogaster. [FBrf0168007]
Hallem and Carlson, 2004, Trends Genet. 20(9): 453--459The odor coding system of Drosophila. [FBrf0179899]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
FBrf0208510 Or19b[KK115373]
5 80 CG12700 skpD skpD   X Testis
Roberts et al., 2012, PLoS ONE 7(2): e31284Defining Components of the ?catenin Destruction Complex and Exploring Its Regulation and Mechanisms of Action during Development. [FBrf0217546]
Mosallanejad et al., 2010, J. Insect Physiol. 56(12): 1973--1985Ecdysone signaling and transcript signature in Drosophila cells resistant against methoxyfenozide. [FBrf0212166]
Greene et al., 2005, Hum. Mol. Genet. 14(6): 799--811Genetic and genomic studies of Drosophila parkin mutants implicate oxidative stress and innate immune responses in pathogenesis. [FBrf0184023]
Murphy, 2003, J. Cell Sci. 116(11): 2321--2332Drosophila skpA, a component of SCF ubiquitin ligases, regulates centrosome duplication independently of cyclin E accumulation. [FBrf0159039]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
NIG-Fly 12700R-1 skpD[NIG.12700R]
NIG-Fly 12700R-2 skpD[NIG.12700R]
VDRC v38702 w[1118]; P{GD7802}v38702
VDRC v38703 w[1118]; P{GD7802}v38703
VDRC v49122 w[1118]; P{GD17334}v49122
FBrf0208510 skpD[KK116032]
5 81 CG9573 Rcd-1r Rcd-1 related   2L Testis
D?az-Castillo and Ranz, 2012, Mol. Biol. Evol. 29(9): 2105--2108Nuclear chromosome dynamics in the Drosophila male germ line contribute to the nonrandom genomic distribution of retrogenes. [FBrf0219274]
Zhan et al., 2011, Gene 470(1-2): 1--6Evolution of alternative splicing in newly evolved genes of Drosophila. [FBrf0212278]
Quezada-D?az et al., 2010, Genetica 138(9-10): 925--937Drcd-1 related: a positively selected spermatogenesis retrogene in Drosophila. [FBrf0211952]
Bai et al., 2007, Genome Biol. 8(1): R11Comparative genomics reveals a constant rate of origination and convergent acquisition of functional retrogenes in Drosophila. [FBrf0192134]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Kyoto DGRC 104144 w[*]; P{GawB}Rcd-1r[NP2268] / CyO
Kyoto DGRC 104798 w[*]; P{w[+mW.hs]=GawB}NP4820 / CyO
Kyoto DGRC 141293 y[*] w[*]; PBac{SAstopDsRed}LL04570 P{ry[+t7.2]=neoFRT}40A P{w[+mW.hs]=FRT(w[hs])}G13 cn[1] bw[1] / CyO, S[*] bw[1]
Kyoto DGRC 200367 y[1] w[67c23]; P{w[+mC]=GSV1}GS2254 / SM1
NIG-Fly 9573R-1 Rcd-1r[NIG.9573R]
NIG-Fly 9573R-2 Rcd-1r[NIG.9573R]
BDSC 11773 P{ry[+t7.2]=PZ}Rcd-1r[07717] CG13102[07717] cn[1]/CyO; ry[506]
BDSC 19708 y[1] w[67c23]; P{w[+mC] y[+mDint2]=EPgy2}CG13102[EY05403]
BDSC 36151 y[1] w[*]; Mi{y[+mDint2]=MIC}CG13102[MI02851] Rcd-1r[MI02851]
BDSC 36683 y[1] sc[*] v[1]; P{y[+t7.7] v[+t1.8]=TRiP.HMS01571}attP2
Exelixis at Harvard Medical School - PBac{WH}f02431
FBrf0218712 Rcd-1r[GD17713]
5 82 CG32598 βNACtes6   X *
Olenkina et al., 2012, Gene 499(1): 143--153Promoter contribution to the testis-specific expression of Stellate gene family in Drosophila melanogaster. [FBrf0218043]
Herranz et al., 2010, Mol. Ecol. 19(19): 4255--4264Spaceflight-related suboptimal conditions can accentuate the altered gravity response of Drosophila transcriptome. [FBrf0216346]
Usakin et al., 2005, Mol. Biol. Evol. 22(7): 1555--1560An alien promoter capture as a primary step of the evolution of testes-expressed repeats in the Drosophila melanogaster genome. [FBrf0188092]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
FBrf0208510 - βNACtes6[KK116174]
5 83 CG32706 CG32706   X *
Ayres et al., 2008, Genetics 178(3): 1807--1815Identification of Drosophila mutants altering defense of and endurance to Listeria monocytogenes infection. [FBrf0205079]
Fan et al., 2008, Mol. Biol. Evol. 25(7): 1451--1458Recurrent tandem gene duplication gave rise to functionally divergent genes in Drosophila. [FBrf0205377]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
BDSC 10881 w[1118] PBac{w[+mC]=PB}c02279
BDSC 33316 w[*] P{w[+mC]=EP}CG32706[G17504]
Exelixis at Harvard Medical School - PBac{PB}c02279
FBrf0208510 - CG32706[KK116132]
5 84 CG32652 CG32652   X *
Artieri and Singh, 2010, BMC Biol. 8: 26Molecular evidence for increased regulatory conservation during metamorphosis, and against deleterious cascading effects of hybrid breakdown in Drosophila. [FBrf0210614]
Andrews et al., 2000, Genome Res. 10(12): 2030--2043Gene discovery using computational and microarray analysis of transcription in the Drosophila melanogaster testis. [FBrf0132348]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
VDRC v46894 w[1118]; P{GD17196}v46894
VDRC v50030 w[1118]; P{GD17196}v50030/TM3
5 85 CG17440 CG17440   X Testis
Ibrahim et al., 2011, IEEE/ACM Trans. Comput. Biol. Bioinform. 8(2): 326--334Using qualitative probability in reverse-engineering gene regulatory networks. [FBrf0212951]
Zhan et al., 2011, Gene 470(1-2): 1--6Evolution of alternative splicing in newly evolved genes of Drosophila. [FBrf0212278]
Anholt and Williams, 2010, Chem. Senses 35(1): 21--30The soluble proteome of the Drosophila antenna. [FBrf0209552]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
VDRC v104733 P{KK112768}VIE-260B
5 86 CG32673 Rab9E Rab at 9E   X *
Uytterhoeven et al., 2011, Cell 145(1): 117--132Loss of skywalker reveals synaptic endosomes as sorting stations for synaptic vesicle proteins. [FBrf0213384]
Hutter, 2007, Adv. Genet. 58: 1--23Rapidly evolving Rab GTPase paralogs and reproductive isolation in Drosophila. [FBrf0199126]
Zhang et al., 2007, Genetics 176(2): 1307--1322Thirty-one flavors of Drosophila Rab proteins. [FBrf0201049]
Hutter, 2002, Dev. Genes Evol. 212(10): 504--512X-linked small GTPase and OXPHOS genes are candidates for the genetic basis of hybrid inviability in Drosophila. [FBrf0151909]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
BDSC 9831 y[1] w[*]; P{w[+mC]=UASp-YFP.CG32673.D67L}05
BDSC 9832 y[1] w[*]; P{w[+mC]=UASp-YFP.CG32673.D67L}17
BDSC 9833 y[1] w[*]; P{w[+mC]=UASp-YFP.CG32673}35
BDSC 9834 y[1] w[*]; P{w[+mC]=UASp-YFP.CG32673}42
BDSC 23254 y[1] w[*]; P{w[+mC]=UAST-YFP.CG32673.T21N}01
BDSC 23255 y[1] w[*]; P{w[+mC]=UAST-YFP.CG32673.T21N}CG31211[02]
5 87 CG14810 CG14810   X Testis
Anholt and Williams, 2010, Chem. Senses 35(1): 21--30The soluble proteome of the Drosophila antenna. [FBrf0209552]
Straub et al., 2005, Genes Dev. 19(19): 2284--2288The Drosophila MSL complex activates the transcription of target genes. [FBrf0190565]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Kyoto DGRC 125370 w[1118] P{RS5}5-HA-1727
VDRC v28528 w[1118]; P{GD13094}v28528
VDRC v28530 w[1118]; P{GD13094}v28530
VDRC v33884 w[1118]; P{GD15540}v33884/TM3
VDRC v33885 w[1118]; P{GD15540}v33885
Exelixis at Harvard Medical School - PBac{WH}f07575
FBrf0202579 CG14810[GD17367]
FBrf0208510 CG14810[KK111198]
5 88 CG5334 CG5334   X Testis
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
NIG-Fly 5334R-1 CG5334[NIG.5334R]
NIG-Fly 5334R-3 CG5334[NIG.5334R]
VDRC v102765 P{KK112373}VIE-260B
FBrf0202579 - CG5334[GD10727]
5 89 CG18157 βNACtes2   X Testis, Larval fat body
Olenkina et al., 2012, Gene 499(1): 143--153Promoter contribution to the testis-specific expression of Stellate gene family in Drosophila melanogaster. [FBrf0218043]
Usakin et al., 2005, Mol. Biol. Evol. 22(7): 1555--1560An alien promoter capture as a primary step of the evolution of testes-expressed repeats in the Drosophila melanogaster genome. [FBrf0188092]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
VDRC v103346 P{KK112951}VIE-260B
FBrf0202579 - βNACtes2[GD17762]
FBrf0202579 - βNACtes2[GD9523]
5 90 CG17024 CR17024   2L Tubule
Rees et al., 2011, Mol. Cell. Proteomics 10(6): M110.002386In Vivo Analysis of Proteomes and Interactomes Using Parallel Affinity Capture (iPAC) Coupled to Mass Spectrometry. [FBrf0213845]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Kyoto DGRC 105419 y[*] w[*]; P{w[+mW.hs]=GawB}bun[NP7306] / CyO, P{w[-]=UAS-lacZ.UW14}UW14 no map data!
VDRC v100888 P{KK105083}VIE-260B
VDRC v50186 w[1118]; P{GD8787}v50186/TM3
VDRC v50187 w[1118]; P{GD8787}v50187
5 91 CG31909 CG31909   2L Testis
Zhan et al., 2011, Gene 470(1-2): 1--6Evolution of alternative splicing in newly evolved genes of Drosophila. [FBrf0212278]
Zhou et al., 2008, Genome Res. 18(9): 1446--1455On the origin of new genes in Drosophila. [FBrf0206967]
Levine et al., 2006, Proc. Natl. Acad. Sci. U.S.A. 103(26): 9935--9939Novel genes derived from noncoding DNA in Drosophila melanogaster are frequently X-linked and exhibit testis-biased expression. [FBrf0195088]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
VDRC v41772 w[1118] P{GD10402}v41772
FBrf0202579 CG31909[GD16944]
5 92 CG32021 CG32021   4 Thoracicoabdominal ganglion, Crop, Tubule, Hindgut, Fat body, Larval CNS, Larval hindgut, Larval fat body, Larval trachea, S2 cells (growing)
Leung et al., 2010, Genetics 185(4): 1519--1534Evolution of a Distinct Genomic Domain in Drosophila: Comparative Analysis of the Dot Chromosome in Drosophila melanogaster and Drosophila virilis. [FBrf0211495]
Riddle et al., 2008, Genetics 178(3): 1177--1191An investigation of heterochromatin domains on the fourth chromosome of Drosophila melanogaster. [FBrf0205417]
Zhou et al., 2008, Mol. Cell 32(4): 592--599Comparative analysis of argonaute-dependent small RNA pathways in Drosophila. [FBrf0206362]
Lipatov et al., 2005, BMC Biol. 3: 24Paucity of chimeric gene-transposable element transcripts in the Drosophila melanogaster genome. [FBrf0189752]
Sun et al., 2004, Mol. Cell. Biol. 24(18): 8210--8220cis-acting determinants of heterochromatin formation on Drosophila melanogaster chromosome four. [FBrf0180536]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Kyoto DGRC 105043 y[*] w[*]; P{w[+mW.hs]=GawB}CG32021[NP5626]
Kyoto DGRC 112182 w[*]; P{w[+mW.hs]=GawB}NP0429
Kyoto DGRC 123770 w[1118]; P{w[+mW.Scer\FRT.hs]=RS3}CG32021[CB-5708-3]
VDRC v102286 P{KK111438}VIE-260B
VDRC v22762 w[1118]; P{GD12970}v22762
VDRC v22763 w[1118]; P{GD12970}v22763
VDRC v33930 w[1118]; P{GD15808}v33930/CyO
5 93 CG1924 CG1924   X Tubule, Testis, Male accessory glands, Larval Salivary gland
D?az-Castillo and Ranz, 2012, Mol. Biol. Evol. 29(9): 2105--2108Nuclear chromosome dynamics in the Drosophila male germ line contribute to the nonrandom genomic distribution of retrogenes. [FBrf0219274]
Zhan et al., 2011, Gene 470(1-2): 1--6Evolution of alternative splicing in newly evolved genes of Drosophila. [FBrf0212278]
Markstein et al., 2002, Proc. Natl. Acad. Sci. U.S.A. 99(2): 763--768Genome-wide analysis of clustered Dorsal binding sites identifies putative target genes in the Drosophila embryo. [FBrf0145207]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
VDRC v102773 P{KK112400}VIE-260B
VDRC v52347 w[1118]; P{GD17780}v52347
VDRC v52348 w[1118]; P{GD17780}v52348/TM3
5 94 CG32616 Ste12DOR Stellate 12D orphon   X *
Kim et al., 2010, Exp. Gerontol. 45(7-8): 611--620Gene expression profiling implicates OXPHOS complexes in lifespan extension of flies over-expressing a small mitochondrial chaperone, Hsp22. [FBrf0210880]
Lecuyer et al., 2007, Cell 131(1): 174--187Global analysis of mRNA localization reveals a prominent role in organizing cellular architecture and function. [FBrf0200939]
Laviolette et al., 2005, Genetics 170(2): 779--792A genetic screen for suppressors of Drosophila NSF2 neuromuscular junction overgrowth. [FBrf0187645]
Tritto et al., 2003, Genetica 117(2-3): 247--257Structure, regulation and evolution of the crystal-Stellate system of Drosophila. [FBrf0158965]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Kyoto DGRC 205033 y[1] w[67c23] P{w[+mC]=GSV1}GS1195/Binsinscy
FBrf0208510 - Ste12DOR[KK115939]
5 95 CG2885 RabX2 RabX2   X Testis
Ma et al., 2012, Genetics 190(4): 1299--1308Membrane phospholipid asymmetry counters the adverse effects of sterol overloading in the Golgi membrane of Drosophila. [FBrf0217992]
Uytterhoeven et al., 2011, Cell 145(1): 117--132Loss of skywalker reveals synaptic endosomes as sorting stations for synaptic vesicle proteins. [FBrf0213384]
Vidal, Stec, et. al. 2010, J. Cell Sci. 123 3457--3466Negative regulation of Drosophila JAK-STAT signalling by endocytic trafficking. [FBrf0211993][20841381][10.1242/jcs.066902]
Zhang, Schulze, et. al. 2007, Genetics 176 1307--1322Thirty-one flavors of Drosophila Rab proteins. [FBrf0201049][17409086][ 10.1534/genetics.106.066761]
Hutter, 2007, Adv. Genet. 58 1--23Rapidly evolving Rab GTPase paralogs and reproductive isolation in Drosophila. [FBrf0151909][12424521]
Pereira-Leal and Seabra 2001 Evolution of the Rab family of small GTP-binding proteins. J. Mol. Biol. 313 889--901 paper
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
BDSC 9841 y[1] w[*]; P{w[+mC]=UASp-YFP.RabX2.D66L}CG17646[10]
BDSC 9842 y[1] w[*]; P{w[+mC]=UASp-YFP.RabX2.D66L}21
BDSC 9843 y[1] w[*]; P{w[+mC]=UASp-YFP.RabX2.S21N}for[02]/SM5
BDSC 23275 y[1] w[*]; P{w[+mC]=UASp-YFP.RabX2}CG4936[08] /TM3, Sb[1]
BDSC 23644 y[1] w[*]; P{w[+mC]=UASp-YFP.RabX2.S21N}CG3408[05]
BDSC 29222 w[1118] Mi{ET1}RabX2[MB11526] CG32683[MB11526]
BDSC 32360 y[1] sc[*] v[1]; P{y[+t7.7] v[+t1.8]=TRiP.HMS00351}attP2
VDRC v103311 P{KK112853}VIE-260B
VDRC v49850 w[1118]; P{GD17785}v49850/TM3
VDRC v49851 w[1118]; P{GD17785}v49851
5 96 CG2941 CG2941   X Ovary, Larval CNS
Svensson et al., 2007, Dev. Genes Evol. 217(9): 639--650Organization and regulation of sex-specific thioredoxin encoding genes in the genus Drosophila. [FBrf0201263]
Gilfillan et al., 2006, Genes Dev. 20(7): 858--870Chromosome-wide gene-specific targeting of the Drosophila dosage compensation complex. [FBrf0190543]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Kyoto DGRC 105123 y[*] w[*] P{GawB}NP6097 / FM7c CG2938
Kyoto DGRC 201276 y[1] w[67c23] P{w[+mC]=GSV2}GS7465 / Binsinscy
BDSC 14942 y[1] P{y[+mDint2] w[BR.E.BR]=SUPor-P}KG08206/FM7c CG2938
BDSC 15324 y[1] w[67c23] P{w[+mC] y[+mDint2]=EPgy2}CG2941[EY01103]
BDSC 35667 y[1] sc[*] v[1]; P{y[+t7.7] v[+t1.8]=TRiP.GLV21032}attP2
5 97 CG7804 CG7804   3L Testis
Estes et al., 2011, Hum. Mol. Genet. 20(12): 2308--2321Wild-type and A315T mutant TDP-43 exert differential neurotoxicity in a Drosophila model of ALS. [FBrf0213802]
Zhan et al., 2011, Gene 470(1-2): 1--6Evolution of alternative splicing in newly evolved genes of Drosophila. [FBrf0212278]
Lasko, 2000, J. Cell Biol. 150(2): F51--F56The Drosophila melanogaster genome: translation factors and RNA binding proteins. [FBrf0129923]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
BDSC 23028 y[1] w[67c23]; Mi{ET1}CG7804[MB01233]
BDSC 36014 y[1] w[*]; Mi{y[+mDint2]=MIC}CG7804[MI02615]
VDRC v28067 w[1118] P{GD12287}v28067
VDRC v28068 w[1118]; P{GD12287}v28068
VDRC v49886 w[1118] P{GD17843}v49886
VDRC v49887 w[1118] P{GD17843}v49887
FBrf0208510 CG7804[KK103253]
5 98 CG12493 CG12493   3L Tubule, Testis
Gerbasi et al., 2011, Proc. Natl. Acad. Sci. U.S.A. 108(8): 3204--3209Blanks, a nuclear siRNA/dsRNA-binding complex component, is required for Drosophila spermiogenesis. [FBrf0213185]
Ferjoux et al., 2007, Dev. Biol. 305(2): 726--734A GATA/RUNX cis-regulatory module couples Drosophila blood cell commitment and differentiation into crystal cells. [FBrf0200672]
Lundgren et al., 2005, Mol. Cell. Biol. 25(11): 4662--4675Identification and characterization of a Drosophila proteasome regulatory network. [FBrf0188596]
Lasko, 2000, J. Cell Biol. 150(2): F51--F56The Drosophila melanogaster genome: translation factors and RNA binding proteins. [FBrf0129923]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
NIG-Fly 12493R-1 CG12493[NIG.12493R]
NIG-Fly 12493R-2 CG12493[NIG.12493R]
BDSC 27159 y[1] w[*]; P{w[+mC]=EP}Gef64C[G4506] CG12493[G4506]
BDSC 32712 y[1] w[*]; Mi{y[+mDint2]=MIC}Gef64C[MI00868] CG12493[MI00868]/TM3, Sb[1] Ser[1]
VDRC v102360 P{KK111560}VIE-260B
VDRC v31948 w[1118] P{GD7742}v31948
VDRC v49836 w[1118]; P{GD17731}v49836/CyO
VDRC v49837 w[1118]; P{GD17731}v49837/TM3
5 99 CG33797 CR33797   4 -
Zhang et al., 2011, Bioinformatics 27(13): 1749--1753A cautionary note for retrocopy identification: DNA-based duplication of intron-containing genes significantly contributes to the origination of single exon genes. [FBrf0216536]
Leung et al., 2010, Genetics 185(4): 1519--1534Evolution of a Distinct Genomic Domain in Drosophila: Comparative Analysis of the Dot Chromosome in Drosophila melanogaster and Drosophila virilis. [FBrf0211495]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
VDRC v46340 w[1118]; P{GD16890}v46340
VDRC v46342 w[1118]; P{GD16890}v46342/TM3
5 100 CG32670 Rab9Fb Rab at 9Fb   X Testis
Daines, Wang, et. al. 2011, Genome Res. 21 315--324The Drosophila melanogaster transcriptome by paired-end RNA sequencing. [FBrf0213064][21177959][10.1101/gr.107854.110]
Uytterhoeven et al., 2011, Cell 145(1): 117--132Loss of skywalker reveals synaptic endosomes as sorting stations for synaptic vesicle proteins. [FBrf0213384]
Babenko, Pokholkova, et. al. 2009, Dokl. Biochem. Biophys.Characteristics of molecular-genetic organization of intercalary heterochromatin band 10A1-2 in X chromosome of Drosophila melanogaster. [FBrf0207731][19341102]
Zhang, Schulze, et. al. 2007, Genetics 176 1307--1322Thirty-one flavors of Drosophila Rab proteins. [FBrf0201049][17409086][ 10.1534/genetics.106.066761]
Hutter, 2007, Adv. Genet. 58 1--23Rapidly evolving Rab GTPase paralogs and reproductive isolation in Drosophila. [FBrf0151909][12424521]
Kouranti, Sachse, et. al. 2006 Rab35 regulates an endocytic recycling pathway essential for the terminal steps of cytokinesis. Curr. Biol. 16 1719--1725 paperThornton and Long 2005 Excess of Amino Acid Substitutions Relative to Polymorphism Between X-Linked Duplications in Drosophila melanogaster. Mol. Biol. Evol. 22 273--284 paperHutter 2002 X-linked small GTPase and OXPHOS genes are candidates for the genetic basis of hybrid inviability in Drosophila. Dev. Genes Evol. 212 504--512 paperPereira-Leal and Seabra 2001 Evolution of the Rab family of small GTP-binding proteins. J. Mol. Biol. 313 889--901 paper
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
BDSC 9844 y[1] w[*]; P{w[+mC]=UASp-YFP.Rab9Fb.D66L}wdb[19]/TM3, Sb[1]
BDSC 9845 y[1] w[*]; P{w[+mC]=UAST-YFP.Rab9Fb.S21N}G-oalpha47A[01]/CyO
BDSC 9846 y[1] w[*]; P{w[+mC]=UAST-YFP.Rab9Fb.S21N}26-29-p[03]
BDSC 9847 y[1] w[*]; P{w[+mC]=UASp-YFP.Rab9Fb}38
BDSC 23276 y[1] w[*]; P{w[+mC]=UASp-YFP.Rab9Fb}how[Rab24]
BDSC 34374 y[1] sc[*] v[1]; P{y[+t7.7] v[+t1.8]=TRiP.HMS01364}attP2
VDRC v102312 P{KK109692}VIE-260B
VDRC v52372 w[1118]; P{GD17802}v52372
VDRC v52373 w[1118]; P{GD17802}v52373
5 101 CG12184 CG12184   X Testis
Zhan et al., 2011, Gene 470(1-2): 1--6Evolution of alternative splicing in newly evolved genes of Drosophila. [FBrf0212278]
Anholt and Williams, 2010, Chem. Senses 35(1): 21--30The soluble proteome of the Drosophila antenna. [FBrf0209552]
Negre et al., 2006, PLoS Biol. 4(6): e170Chromosomal distribution of PcG proteins during Drosophila development. [FBrf0191372]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
VDRC v106425 P{KK112408}VIE-260B
VDRC v49120 w[1118]; P{GD17325}v49120
VDRC v49121 w[1118] P{GD17325}v49121
5 102 CG15578 CG15578   X Testis
Negre et al., 2006, PLoS Biol. 4(6): e170Chromosomal distribution of PcG proteins during Drosophila development. [FBrf0191372]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
VDRC v105846 P{KK111274}VIE-260B
VDRC v28088 w[1118]; P{GD12509}v28088/TM3
5 103 CG3410 lectin-24A lectin-24A   2L Midgut
Keebaugh and Schlenke, 2012, Mol. Biol. Evol. 29(2): 565--577Adaptive evolution of a novel Drosophila lectin induced by parasitic wasp attack. [FBrf0217431]
Wertheim et al., 2011, Mol. Ecol. 20(5): 932--949Functional genomics of the evolution of increased resistance to parasitism in Drosophila. [FBrf0213049]
Stofanko et al., 2010, PLoS ONE 5(11): e14051Lineage tracing of lamellocytes demonstrates Drosophila macrophage plasticity. [FBrf0212461]
Tanji et al., 2006, Biochem. J. 396(1): 127--138Participation of a galactose-specific C-type lectin in Drosophila immunity. [FBrf0189817]
Wertheim et al., 2005, Genome Biol. 6(11): R94Genome-wide gene expression in response to parasitoid attack in Drosophila. [FBrf0190809]
Bouyain et al., 2002, J. Biol. Chem. 277(25): 22566--22572An endogenous Drosophila receptor for glycans bearing alpha 1,3-linked core fucose residues. [FBrf0149058]
Theopold et al., 1999, Biochem. Biophys. Res. Commun. 261(3): 923--927Insect glycobiology: A lectin multigene family in Drosophila melanogaster. [FBrf0110927]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
VDRC v107254 P{KK105776}VIE-260B
VDRC v37836 w[1118] P{GD5097}v37836
VDRC v37837 w[1118]; P{GD5097}v37837/TM3
5 104 CG11260 CG11260   4 *
Leung et al., 2010, Genetics 185(4): 1519--1534Evolution of a Distinct Genomic Domain in Drosophila: Comparative Analysis of the Dot Chromosome in Drosophila melanogaster and Drosophila virilis. [FBrf0211495]
Sousa-Neves et al., 2005, Genetics 170(1): 127--138High-resolution mapping of the Drosophila fourth chromosome using site-directed terminal deficiencies. [FBrf0187662]
5 105 CG9906 Cnx14D   X Testis
Chen et al., 2012, Cell Rep. 1(2): 118--132Frequent Recent Origination of Brain Genes Shaped the Evolution of Foraging Behavior in Drosophila. [FBrf0217835]
Parker et al., 2011, Genetics 187(2): 523--534Drosophila as a Model for Epilepsy: bss Is a Gain-of-Function Mutation in the Para Sodium Channel Gene That Leads to Seizures. [FBrf0213034]
Zhan et al., 2011, Gene 470(1-2): 1--6Evolution of alternative splicing in newly evolved genes of Drosophila. [FBrf0212278]
Bourbon et al., 2002, Mech. Dev. 110(1-2): 71--83A P-insertion screen identifying novel X-linked essential genes in Drosophila. [FBrf0141645]
Christodoulou et al., 1997, Gene 191(2): 143--148Nucleotide sequence of a Drosophila melanogaster cDNA encoding a calnexin homologue. [FBrf0094438]
Hong and Ganetzky, 1996, Genetics 142(3): 879--892Molecular characterization of neurally expressing genes in the para sodium channel gene cluster of Drosophila. [FBrf0086460]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
BDSC 14077 y[1] P{y[+mDint2] w[BR.E.BR]=SUPor-P}para[KG01807]
VDRC v102924 P{KK113360}VIE-260B
VDRC v5597 w[1118] P{GD1173}v5597
FBrf0141645 - Cnx14D[PG156]
FBrf0141645 - Cnx14D[PL42]
5 106 CG18477 CG18477   2L *
Ellis and Carney, 2011, Genetics 187(1): 157--169Socially-Responsive Gene Expression in Male Drosophila melanogaster Is Influenced by the Sex of the Interacting Partner. [FBrf0212780]
Kwon et al., 2008, Dev. Biol. 316(2): 538--547The nucleosome remodeling factor (NURF) regulates genes involved in Drosophila innate immunity. [FBrf0205067]
Geng and MacDonald, 2007, Fly 1(5): 259--267Identification of genes that influence gurken expression. [FBrf0205043]
Wertheim et al., 2005, Genome Biol. 6(11): R94Genome-wide gene expression in response to parasitoid attack in Drosophila. [FBrf0190809]
Ross et al., 2003, Gene 304(1-2): 117--131Serine proteases and their homologs in the Drosophila melanogaster genome: an initial analysis of sequence conservation and phylogenetic relationships. [FBrf0155784]
Christophides et al., 2002, Science 298(5591): 159--165Immunity related genes and gene families in Anopheles gambiae. [FBrf0159548]
Ashburner et al., 1999, Genetics 153(1): 179--219An exploration of the sequence of a 2.9-Mb region of the genome of Drosophila melanogaster. The Adh region. [FBrf0111326]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Kyoto DGRC 111641 y[d2] w[1118] P{ry[+t7.2]=ey-FLP.N}2 P{GMR-lacZ.C(38.1)}TPN1; P{y[+mDint2] w[BR.E.BR]=SUPor-P}CG18477[KG07704] P{ry[+t7.2]=neoFRT}40A/CyO y[+]
NIG-Fly 18477R-3 CG18477[NIG.18477R]
NIG-Fly 18477R-5 CG18477[NIG.18477R]
BDSC 14922 y[1]; P{y[+mDint2] w[BR.E.BR]=SUPor-P}CG18477[KG07704]/CyO; ry[506]
5 107 CG9902 CG9902   X Brain, Ovary, Testis, S2 cells (growing)
The modENCODE Consortium, 2010, Science 330(6012):DataS14: Gene co-expression clusters. [FBrf0213979]
Mummery-Widmer et al., 2009, Nature 458(7241):Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Giot et al., 2003, Science 302(5651):Tables S1 to S7. [FBrf0166452]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Kyoto DGRC 201934 y[1] w[67c23] P{w[+mC]=GSV7}GS20798 / Binsinscy Arp2
BDSC 15811 y[1] w[67c23] P{w[+mC] y[+mDint2]=EPgy2}CG9902[EY05861]
VDRC v102850 P{KK105465}VIE-260B
VDRC v36458 w[1118] P{GD14717}v36458
VDRC v50549 w[1118]; P{GD17552}v50549/CyO
Exelixis at Harvard Medical School - PBac{PB}CG9902[c00834]
Exelixis at Harvard Medical School - PBac{PB}CG9902[c01414]
5 108 CG8821 vis vismay   2R Testis, S2 cells (growing)
Zhan et al., 2011, Gene 470(1-2): 1--6Evolution of alternative splicing in newly evolved genes of Drosophila. [FBrf0212278]
Daines, Wang, et. al. 2011, Genome Res. 21 315--324The Drosophila melanogaster transcriptome by paired-end RNA sequencing. [FBrf0213064][21177959][10.1101/gr.107854.110]
Fedorka et al., 2011, Evolution 65(2): 584--590Perceived sperm competition intensity influences seminal fluid protein production prior to courtship and mating. [FBrf0212865]
Doggett et al., 2011, Dev. Biol. 355(2): 381--393Wake-up-call, a lin-52 paralogue, and Always early, a lin-9 homologue physically interact, but have opposing functions in regulating testis-specific gene expression. [FBrf0213964]
Chen et al., 2011, Development 138(12): 2441--2450Sequential changes at differentiation gene promoters as they become active in a stem cell lineage. [FBrf0213772]
White-Cooper 2010 Molecular mechanisms of gene regulation during Drosophila spermatogenesis. Reproduction 139 11--21 paperZhao, Klyne, et. al. 2010 FlyTED: the Drosophila Testis Gene Expression Database. Nucleic Acids Res. 38 D710--D715 paperWang, Wang, et. al. 2008 Transgenic analyses of TGIF family proteins in Drosophila imply their role in cell growth. J. Genet. Genomics 35 457--465 paperGeorlette, Ahn, et. al. 2007 Genomic profiling and expression studies reveal both positive and negative activities for the Drosophila Myb-MuvB/dREAM complex in proliferating cells. Genes Dev. 21 2880--2896 paperJiang, Benson, et. al. 2007 Tombola, a tesmin/TSO1-family protein, regulates transcriptional activation in the Drosophila male germline and physically interacts with Always early. Development 134 1549--1559 paperBoutanaev, Mikhaylova, et. al. 2007 Up-regulation of the Ku heterodimer in Drosophila testicular cyst cells. FEBS Lett. 581 1707--1715 paperMikhaylova, Boutanaev, et. al. 2006 Transcriptional regulation by Modulo integrates meiosis and spermatid differentiation in male germ line. Proc. Natl. Acad. Sci. U.S.A. 103 11975--11980 paperLiu, Ni, et. al. 2005 Sex-specific role of Drosophila melanogaster HP1 in regulating chromatin structure and gene transcription. Nat. Genet. 37 1361--1366 paperInlow and Restifo updated 2004 Molecular and comparative genetics of mental retardation. Genetics 166 835--881 paperAyyar, Jiang, et. al. 2003 Drosophila TGIF is essential for developmentally regulated transcription in spermatogenesis. Development 130 2841--2852 paperHyman, Bartholin, et. al. 2003 Drosophila TGIF proteins are transcriptional activators. Mol. Cell. Biol. 23 9262--9274 paperWang and Mann 2003 Requirement for two nearly identical TGIF-related homeobox genes in Drosophila spermatogenesis. Development 130 2853--2865 paper
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
BDSC 8509 w[*]; Df(2R)pingpong, achi[pingpong]/CyO; P{w[+mW.hs]=vis}3/MKRS
BDSC 28451 y[1] w[*]; P{w[+mC]=EP}vis[G2720]
BDSC 29544 y[1] v[1]; P{y[+t7.7] v[+t1.8]=TRiP.JF02406}attP2
BDSC 35738 y[1] sc[*] v[1]; P{y[+t7.7] v[+t1.8]=TRiP.HMS01480}attP2
BDSC 41374 y[1] w[*]; Mi{y[+mDint2]=MIC}MI00753 achi
VDRC v49639 w[1118]; P{GD17540}v49639
VDRC v49640 w[1118]; P{GD17540}v49640
VDRC v52633 w[1118]; P{GD17540}v52633
FBrf0200092, FBrf0160387 - vis[achi-1]
FBrf0213964, FBrf0194011, FBrf0160387 - vis[Z3922]
5 109 CG33252 CG33252   X Testis
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
VDRC v104034 P{KK112524}VIE-260B
VDRC v48444 w[1118]; P{GD16032}v48444/CyO
VDRC v48445 w[1118]; P{GD16032}v48445/CyO
5 110 CG10781 ng1 new glue 1   X Larval Salivary gland
Zhai et al., 2012, PLoS Genet. 8(3): e1002582 Antagonistic regulation of apoptosis and differentiation by the cut transcription factor represents a tumor-suppressing mechanism in Drosophila. [FBrf0217859]
Hens, Feuz, et. al. 2011 Automated protein-DNA interaction screening of Drosophila regulatory elements. Nat. Methods 8 1065--1070 paperSharma et al., 2011, Chemosphere 82(3): 370--376 Transcriptome analysis provides insights for understanding the adverse effects of endosulfan in Drosophila melanogaster. [FBrf0212610]
Kuan, Brewer-Jensen, et. al. 2009 Drosophila suppressor of sable protein [Su(s)] promotes degradation of aberrant and transposon-derived RNAs. Mol. Cell. Biol. 29 5590--5603 paperLiu and Lehmann 2008 Genes and biological processes controlled by the Drosophila FOXA orthologue Fork head. Insect Mol. Biol. 17 91--101 paperYin, Thummel, et. al. 2007 Down-regulation of inhibitor of apoptosis levels provides competence for steroid-triggered cell death. J. Cell Biol. 178 85--92 paperJensen, Bauer DuMont, et. al. 2007 Patterns of sequence variability and divergence at the diminutive gene region of Drosophila melanogaster: complex patterns suggest an ancestral selective sweep. Genetics 177 1071--1085 paperMcBrayer, Ono, et. al. 2007 Prothoracicotropic hormone regulates developmental timing and body size in Drosophila. Dev. Cell 13 857--871 paperReiter, Do, et. al. 2007 Accentuate the negative: proteome comparisons using the negative proteome database. Fly 1 164--171 paperKotlikova, Demakova, et. al. 2006 The Drosophila dosage compensation complex binds to polytene chromosomes independently of developmental changes in transcription. Genetics 172 963--974 paperRifkin, Kim, et. al. 2003 Evolution of gene expression in the Drosophila melanogaster subgroup. Nat. Genet. 33 138--144 paperLi and White 2003 Tissue-specific gene expression and ecdysone-regulated genomic networks in Drosophila. Dev. Cell 5 59--72 paperXu, Fang, et. al. 2002 Activation of transcription through the ligand-binding pocket of the orphan nuclear receptor ultraspiracle. Europ. J. Biochem. 269 6026--6036 paperCrispi, Giordano, et. al. 2001 Functional analysis of regulatory elements controlling the expression of the ecdysone-regulated Drosophila ng-1 gene. Mech. Dev. 100 25--35 paperHall and Thummel 1998 The RXR homolog ultraspiracle is an essential component of the Drosophila ecdysone receptor. Development 125 4709--4717 paperCrispi, Giordano, et. al. 1998 Cross-talking among Drosophila nuclear receptors at the promiscuous response element of the ng-1 and ng-2 intermolt genes. J. Mol. Biol. 275 561--574 paperWang, Miura, et. al. 1998 DNA binding and transactivation characteristics of the mosquito ecdysone receptor-Ultraspiracle complex. J. Biol. Chem. 273 27531--27540 paperFisk and Thummel 1998 The DHR78 nuclear receptor is required for ecdysteroid signaling during the onset of Drosophila metamorphosis. Cell 93 543--555 paperD'Avino, Crispi, et. al. 1995 The moulting hormone ecdysone is able to recognize target elements composed of direct repeats. Molec. Cell. Endocrinol. 113 1--9 paperD'Avino, Crispi, et. al. 1995 Hormonal regulation of the Drosophila melanogaster ng-genes. Europ. J. Ent. 92 259--261 paperD'Avino, Crispi, et. al. 1995 The role of BR-C locus on the expression of genes located at the ecdysone-regulated 3C puff of Drosophila melanogaster. Mech. Dev. 49 161--171 paperFuria, D'Avino, et. al. 1993 Dense cluster of genes is located at the ecdysone-regulated 3C puff of Drosophila melanogaster. J. Mol. Biol. 231 531--538 paperFuria, D'Avino, et. al. 1992 Effect of ecd1 mutation on the expression of genes mapped at the Drosophila melanogaster 3C11-12 intermoult puff. Genet. Res. (Camb.) 59 19--26 paperFuria, Digilio, et. al. 1990 A new gene nested within the dunce genetic unit of Drosophila melanogaster. Nucleic Acids Res. 18 5837--5841 paper
5 111 CG33244 Ste:CG33244 Ste:CG33244   X *
5 112 CG5418 CG5418   2L Head, Heart, Adult carcass, S2 cells (growing)
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
VDRC v22119 w[1118]; P{GD11644}v22119
VDRC v22120 w[1118]; P{GD11644}v22120
5 113 CG11231 CG11231   4 0
Leung et al., 2010, Genetics 185(4): 1519--1534Evolution of a Distinct Genomic Domain in Drosophila: Comparative Analysis of the Dot Chromosome in Drosophila melanogaster and Drosophila virilis. [FBrf0211495]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
BDSC 22279 y[1] w[67c23]; P{y[+t7.7] w[+mC]=wHy}DG37501
VDRC v103455 P{KK113372}VIE-260B
VDRC v38454 w[1118]; P{GD7241}v38454/CyO
VDRC v38455 w[1118]; P{GD7241}v38455
5 114 CG17797 Acp29AB Accessory gland-specific peptide 29AB   2L Male accessory glands
Yang et al., 2011, G3 (Bethesda) 1(6): 427--436Partitioning transcript variation in Drosophila: abundance, isoforms, and alleles. [FBrf0217638] Daines, Wang, et. al. 2011, Genome Res. 21 315--324The Drosophila melanogaster transcriptome by paired-end RNA sequencing. [FBrf0213064][21177959][10.1101/gr.107854.110]
Dottorini et al., 2011, BMC Bioinformatics 12: 34Gepoclu: a software tool for identifying and analyzing gene positional clusters in large-scale gene expression analysis. [FBrf0214379]
Sousa-Neves and Rosas 2010, PLoS ONE 5 e10485An analysis of genetic changes during the divergence of Drosophila species. [FBrf0210766][20463966][10.1371/journal.pone.0010485]
Takemori and Yamamoto, 2009, Proteomics 9(9): 2484--2493Proteome mapping of the Drosophila melanogaster male reproductive system. [FBrf0208046][pmid.19343724][doi.10.1002/pmic.200800795]
Wong, Albright, et. al. 2008 A role for Acp29AB, a predicted seminal fluid lectin, in female sperm storage in Drosophila melanogaster. Genetics 180 921--931 paperMcGraw, Clark, et. al. 2008 Post-mating gene expression profiles of female Drosophila melanogaster in response to time and to four male accessory gland proteins. Genetics 179 1395--1408 paperLai, Parnell, et. al. 2007, Mech. Ageing Dev. 128 237--249 Candidate genes affecting Drosophila life span identified by integrating microarray gene expression analysis and QTL mapping. [FBrf0194081][pmid.17196240][doi.10.1016/j.mad.2006.12.003] Mueller, Page, et. al. 2007, Genetics 175 777--783 An ectopic expression screen reveals the protective and toxic effects of Drosophila seminal fluid proteins. [FBrf0194341][pmid.17110486][doi.10.1534/genetics.106.065318]
Zurovcova, Tatarenkov, et. al. 2006 Differences in the pattern of evolution in six physically linked genes of Drosophila melanogaster. Gene 381 24--33 paperTanji, Ohashi-Kobayashi, et. al. 2006 Participation of a galactose-specific C-type lectin in Drosophila immunity. Biochem. J. 396 127--138 paperFiumera, Dumont, et. al. 2005 Sperm competitive ability in Drosophila melanogaster associated with variation in male reproductive proteins. Genetics 169 243--257 paperWagstaff and Begun 2005 Comparative Genomics of Accessory Gland Protein Genes in Drosophila melanogaster and D. pseudoobscura. Mol. Biol. Evol. 22 818--832 paperMueller, Ram, et. al. 2005 Cross-species comparison of Drosophila male accessory gland protein genes. Genetics 171 131--143 paperMackay, Heinsohn, et. al. 2005 Genetics and genomics of Drosophila mating behavior. Proc. Natl. Acad. Sci. U.S.A. 102 6622--6629 paperMueller, Ripoll, et. al. 2004 Comparative structural modeling and inference of conserved protein classes in Drosophila seminal fluid. Proc. Natl. Acad. Sci. U.S.A. 101 13542--13547 paperFitzpatrick 2004 Pleiotropy and the genomic location of sexually selected genes. Am. Nat. 163 800--808 paperPanhuis, Swanson, et. al. 2003 Population genetics of accessory gland proteins and sexual behavior in Drosophila melanogaster populations from Evolution Canyon. Evolution 57 2785--2791 paperMousset, Brazier, et. al. 2003 Evidence of a high rate of selective sweeps in African Drosophila melanogaster. Genetics 163 599--609 paperLung, Tram, et. al. 2002 The Drosophila melanogaster seminal fluid protein Acp62F is a protease inhibitor that is toxic upon ectopic expression. Genetics 160 211--224 paperAndolfatto 2001 Contrasting patterns of X-Linked and autosomal nucleotide variation in Drosophila melanogaster and Drosophila simulans. Mol. Biol. Evol. 18 279--290 paperWijffels, Eisemann, et. al. 2001 A novel family of chitin-binding proteins from insect type 2 peritrophic matrix. cDNA sequences, chitin binding activity, and cellular localization. J. Biol. Chem. 276 15527--15536 paperAndolfatto and Przeworski 2001 Regions of lower crossing over harbor more rare variants in African populations of Drosophila melanogaster. Genetics 158 657--665 paperRand, Weinreich, et. al. 2000 Neutrality tests of conservative-radical amino acid changes in nuclear- and mitochondrially-encoded proteins. Gene 291 115--125 paper Weinreich and Rand 2000 Contrasting patterns of nonneutral evolution in proteins encoded in nuclear and mitochondrial genomes. Genetics 156 385--399 paperBegun, Whitley, et. al. 2000 Molecular population genetics of male accessory gland proteins in Drosophila. Genetics 156 1879--1888 paperAguade 1999 Positive selection drives the evolution of the Acp29AB accessory gland protein in Drosophila. Genetics 152 543--551 paperTheopold, Rissler, et. al. 1999 Insect glycobiology: A lectin multigene family in Drosophila melanogaster. Biochem. Biophys. Res. Commun. 261 923--927 paperWolfner, Harada, et. al. 1997 New genes for male accessory gland proteins in Drosophila melanogaster. Insect Biochem. Mol. Biol. 27 825--834 paperClark, Aguade, et. al. 1995 Variation in sperm displacement and its association with accessory gland protein loci in Drosophila melanogaster. Genetics 139 189--201 paper
5 115 CG18478 CG18478   2L *
Wertheim et al., 2005, Genome Biol. 6(11): R94Genome-wide gene expression in response to parasitoid attack in Drosophila. [FBrf0190809]
Ross et al., 2003, Gene 304(1-2): 117--131Serine proteases and their homologs in the Drosophila melanogaster genome: an initial analysis of sequence conservation and phylogenetic relationships. [FBrf0155784]
Schmid and Aquadro, 2001, Genetics 159(2): 589--598The evolutionary analysis of 'orphans' from the Drosophila genome identifies rapidly diverging and incorrectly annotated genes. [FBrf0139678]
Reese et al., 2000, Genome Res. 10(4): 529--538Genie - Gene finding in Drosophila melanogaster. [FBrf0127289]
Ashburner et al., 1999, Genetics 153(1): 179--219An exploration of the sequence of a 2.9-Mb region of the genome of Drosophila melanogaster. The Adh region. [FBrf0111326]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
NIG-Fly 18478R-1 CG18478[NIG.18478R]
NIG-Fly 18478R-2 CG18478[NIG.18478R]
5 116 CG4021 CG4021   2R Testis
Ding et al., 2010, PLoS Genet. 6(12): e1001255A young Drosophila duplicate gene plays essential roles in spermatogenesis by regulating several y-linked male fertility genes. [FBrf0212639]
Ryuda et al., 2008, Zool. Sci., Tokyo 25(7): 746--752Analysis of hunger-driven gene expression in the Drosophila melanogaster larval central nervous system. [FBrf0206026]
Yang et al., 2008, PLoS Genet. 4(1): e3Repetitive element-mediated recombination as a mechanism for new gene origination in Drosophila. [FBrf0202722]
Lasko, 2000, J. Cell Biol. 150(2): F51--F56The Drosophila melanogaster genome: translation factors and RNA binding proteins. [FBrf0129923]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
BDSC 29165 w[1118]; Mi{ET1}MB10901
BDSC 30699 y[1] w[*]; Mi{y[+mDint2]=MIC}CG4021[MI00306]/CyO
BDSC 37768 y[1] w[*]; Mi{y[+mDint2]=MIC}MI02403
VDRC v41974 w[1118]; P{GD11190}v41974
VDRC v41975 w[1118]; P{GD11190}v41975
VDRC v52380 w[1118]; P{GD17819}v52380
VDRC v52381 w[1118]; P{GD17819}v52381/TM3
FBrf0212639 - CG4021[T:Avic\GFP]
FBrf0212639 - CG4021[T:Zzzz\TAP]
5 117 CG33246 Ste:CG33246 Ste:CG33246   X *
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Exelixis at Harvard Medical School - PBac{WH}Ste[f08020c]
5 118 CG33242 Ste:CG33242 Ste:CG33242   X *
5 119 CG11942 skpE skpE   X Testis
Bellen et al., 2004, Genetics 167(2): 761--781The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Kyoto DGRC 105373 y[*] w[*] P{w[+mW.hs]=GawB}NP7120 / FM7c
Kyoto DGRC 114083 y[*] w[*] P{w[+mW.hs]=GawB}NP7120 / FM7c
NIG-Fly 11942R-1 skpE[NIG.11942R]
NIG-Fly 11942R-3 skpE[NIG.11942R]
BDSC 20948 y[1] P{w[+mC] y[+mDint2]=EPgy2}EY14581 w[67c23]
VDRC v49118 w[1118]; P{GD17321}v49118/TM3
VDRC v49119 w[1118]; P{GD17321}v49119
FBrf0208510 - skpE[KK115452]
FBrf0214518, FBrf0200327 - skpE[GD4177]
5 120 CG33245 Ste:CG33245 Ste:CG33245   X *
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Exelixis at Harvard Medical School - PBac{WH}Ste[f08020c]
5 121 CG3875 nsr novel spermatogenesis regulator   2R Testis
Ding et al., 2010, PLoS Genet. 6(12): e1001255A young Drosophila duplicate gene plays essential roles in spermatogenesis by regulating several y-linked male fertility genes. [FBrf0212639]
Yang et al., 2008, PLoS Genet. 4(1): e3Repetitive element-mediated recombination as a mechanism for new gene origination in Drosophila. [FBrf0202722]
Drnevich et al., 2004, Proc. Biol. Sci. 271(1554): 2267--2273Quantitative evolutionary genomics: differential gene expression and male reproductive success in Drosophila melanogaster. [FBrf0180658]
Conant and Wagner, 2003, Genome Res. 13(9): 2052--2058Asymmetric sequence divergence of duplicate genes. [FBrf0167689]
Lasko, 2000, J. Cell Biol. 150(2): F51--F56The Drosophila melanogaster genome: translation factors and RNA binding proteins. [FBrf0129923]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
BDSC 32825 y[1] w[*]; Mi{y[+mDint2]=MIC}Cyp6d2[MI02085]/SM6a Cyp6d2
FBrf0202579 - nsr[GD15069]
FBrf0212639 - nsr[+t2.8]
FBrf0212639 - nsr[T:Avic\GFP]
FBrf0212639 - nsr[T:Zzzz\TAP]
FBrf0212639 nsr[null]
5 122 CG10993 CG10993   X Testis, S2 cells (growing)
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Kyoto DGRC 103567 y[*] w[*] P{w[+mW.hs]=GawB}inaE[NP0243] / FM7c
BDSC 19234 w[1118] P{w[+mC]=XP}inaE[d06177]; ?/TM6B, Tb[1]
VDRC v16165 w[1118]; P{GD7161}v16165
VDRC v16166 w[1118]; P{GD7161}v16166
Exelixis at Harvard Medical School - P{XP}inaE[d06177]
5 123 CG18275 CR18275   X *
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
BDSC 16959 y[1] P{w[+mC] y[+mDint2]=EPgy2}CR18275[EY09959] w[67c23]
VDRC v39348 w[1118]; P{GD15810}v39348
VDRC v39349 w[1118]; P{GD15810}v39349
FBrf0208510 - CR18275[KK115859]
5 124 CG15172 CG15172   2L Testis
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Kyoto DGRC 140865 y[*] w[*]; PBac{SAstopDsRed}LL04279 P{ry[+t7.2]=neoFRT}40A P{w[+mW.hs]=FRT(w[hs])}G13 cn[1] bw[1] / CyO, S[*] bw[1]
Kyoto DGRC 206551 y[1] w[67c23]; P{w[+mC]=GSV6}GS16250/SM1
Exelixis at Harvard Medical School - PBac{WH}f03855
Exelixis at Harvard Medical School - PBac{WH}f05589
Exelixis at Harvard Medical School - PBac{PB}c07046
FBrf0202579 - CG15172[GD16266]
5 125 CG3927 CG3927   2R Testis
Paik et al., 2012, Mech. Ageing Dev. 133(5): 234--245Misexpression screen delineates novel genes controlling Drosophila lifespan. [FBrf0218389]
Daines, Wang, et. al. 2011, Genome Res. 21 315--324The Drosophila melanogaster transcriptome by paired-end RNA sequencing. [FBrf0213064][21177959][10.1101/gr.107854.110]
Ding et al., 2010, PLoS Genet. 6(12): e1001255A young Drosophila duplicate gene plays essential roles in spermatogenesis by regulating several y-linked male fertility genes. [FBrf0212639]
Morris, Benson, et. al. 2009, Nat. Protoc. 4 1807--1819Determination of gene expression patterns using in situ hybridization to Drosophila testes. [FBrf0209502][pmid.20010932][doi.10.1038/nprot.2009.192]
Barreau, Benson, et. al. 2008, Development 135 1897--1902Post-meiotic transcription in Drosophila testes.[FBrf0205264][pmid.18434411][doi.10.1242/dev.021949]
Yang et al., 2008, PLoS Genet. 4(1): e3Repetitive element-mediated recombination as a mechanism for new gene origination in Drosophila. [FBrf0202722]
Jiang, Benson, et. al. 2007 Tombola, a tesmin/TSO1-family protein, regulates transcriptional activation in the Drosophila male germline and physically interacts with Always early. Development 134 1549--1559 paperLasko, 2000, J. Cell Biol. 150(2): F51--F56 The Drosophila melanogaster genome: translation factors and RNA binding proteins. [FBrf0129923]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
NIG-Fly 3927R-1 CG3927[NIG.3927R]
NIG-Fly 3927R-2 CG3927[NIG.3927R]
BDSC 14632 y[1] w[67c23]; P{y[+mDint2] w[BR.E.BR]=SUPor-P}CG3927[KG07486]
BDSC 18508 w[1118]; PBac{w[+mC]=WH}CG3927[f02055]
VDRC v29673 w[1118]; P{GD15068}v29673
VDRC v29674 w[1118]; P{GD15068}v29674
Exelixis at Harvard Medical School - PBac{WH}CG3927[f02055]
FBrf0202579 - CG3927[GD17503]
FBrf0212639 - CG3927[null]
FBrf0212639 - CG3927[T:Avic\GFP]
5 126 CG33454 CG33454   2R Salivary gland
Riedl et al., 2007, Fly 1(1): 23--32Genetic and behavioral analysis of natural variation in Drosophila melanogaster pupation position. [FBrf0200063]
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
BDSC 25603 w[1118]; Mi{ET1}MB05546
VDRC v102752 P{KK112344}VIE-260B
5 127 CG33241 Ste:CG33241 Ste:CG33241   X *
5 128 CG18495 Prosα1 Proteasome α1 subunit   2R *
Fredriksson et al., 2012, Aging Cell 11(4): 634--643Effects of aging and reproduction on protein quality control in soma and gametes of Drosophila melanogaster. [FBrf0218923]
Yano et al., 2012, J. Neurogenet. 26(1): 53--63Identification of proteasome components required for apical localization of chaoptin using functional genomics. [FBrf0217843]
Booker et al., 2011, BMC Genomics 12: 50False negative rates in Drosophila cell-based RNAi screens: a case study. [FBrf0212969]
Bader et al., 2011, Cell 145(3): 371--382A conserved f box regulatory complex controls proteasome activity in Drosophila. [FBrf0213568]
Daines, Wang, et. al. 2011, Genome Res. 21 315--324 The Drosophila melanogaster transcriptome by paired-end RNA sequencing. [FBrf0213064][pmid.21177959][doi.10.1101/gr.107854.110]
Varma and Mishra, 2011, J. Biosci., Bangalore 36(3): 439--459Dynamics of nuclear matrix proteome during embryonic development in Drosophila melanogaster. [FBrf0214552]
Chang et al., 2011, PLoS Genet. 7(2): e1001288Pathogenic VCP/TER94 Alleles Are Dominant Actives and Contribute to Neurodegeneration by Altering Cellular ATP Level in a Drosophila IBMPFD Model. [FBrf0213008]
Blanco et al., 2010, BMC Dev. Biol. 10: 94 Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812]
Ravi, Wiles, et. al. 2009 A network of conserved damage survival pathways revealed by a genomic RNAi screen. PLoS Genet. 5 e1000527 paperNickell, Beck, et. al. 2009 Insights into the molecular architecture of the 26S proteasome. Proc. Natl. Acad. Sci. U.S.A. 106 11943--11947 paperMcDermott and Kliman 2008 Estimation of isolation times of the island species in the Drosophila simulans complex from multilocus DNA sequence data. PLoS ONE 3 e2442 paperFirth and Baker updated 2007 Spitz from the retina regulates genes transcribed in the second mitotic wave, peripodial epithelium, glia and plasmatocytes of the Drosophila eye imaginal disc. Dev. Biol. 307 521--538 paperBarbash and Lorigan 2007, J. Exp. Zool. B Mol. Dev. Evol. 308B 74--84 Lethality in Drosophila melanogaster/Drosophila simulans species hybrids is not associated with substantial transcriptional misregulation. [FBrf0201868][pmid.17075830]
Lundgren, Masson, et. al. 2005 Identification and characterization of a Drosophila proteasome regulatory network. Mol. Cell. Biol. 25 4662--4675 paperHarbison, Chang, et. al. 2005 Quantitative genomics of starvation stress resistance in Drosophila. Genome Biol. 6 R36 paperManh, Mokrane, et. al. 2005 Expression of cardiac myosin-binding protein-C (cMyBP-C) in Drosophila as a model for the study of human cardiomyopathies. Hum. Mol. Genet. 14 7--17 paperSumegi, Hunyadi-Gulyas, et. al. 2003 26S proteasome subunits are O-linked N-acetylglucosamine-modified in Drosophila melanogaster. Biochem. Biophys. Res. Commun. 312 1284--1289 paperSpeese, Trotta, et. al. 2003 The ubiquitin proteasome system acutely regulates presynaptic protein turnover and synaptic efficacy. Curr. Biol. 13 899--910 paperStorm and Sonnhammer 2003 Comprehensive analysis of orthologous protein domains using the HOPS database. Genome Res. 13 2353--2362 paperMa, Katz, et. al. 2002 Expression of proteasome subunit isoforms during spermatogenesis in Drosophila melanogaster. Insect Mol. Biol. 11 627--639 paperBohm, Frangakis, et. al. 2000 Toward detecting and identifying macromolecules in a cellular context: template matching applied to electron tomograms. Proc. Natl. Acad. Sci. U.S.A. 97 14245--14250 paper
Stock Center / ReferenceStock No.Genotype / TransgeneNeighbouring Gene
Kyoto DGRC 204809 y[1] w[67c23]; P{w[+mC]=GSV6}GS13590/SM1
NIG-Fly 18495R-3 Prosα1[NIG.18495R]
NIG-Fly 18495R-4 Prosα1[NIG.18495R]
BDSC 17043 w[1118]; P{w[+mC]=EP}Prosalpha1[EP2318]/CyO
BDSC 20203 y[1] w[67c23]; P{w[+mC] y[+mDint2]=EPgy2}CG18853[EY10700] CG18853
FBrf0213008, FBrf0218017, FBrf0157097 Prosα1[SH2342]
  • Branch: Branch number in the phylogenetic tree
  • Gene No.: a reference number according to gene order in Supplementary Table 1 in Zhang et al. (2010)
    [http://genome.cshlp.org/content/suppl/2010/08/27/gr.107334.110.DC1/SupplementalTables.xls]
  • Expression: tissue(s) registered as "Up" by Affymetrix Dros2 expression arrays in FlyAtlas
    • "-"; no data
    • " "; no "Up" tissue
    • "*"; Note that some probes are hybridized with multiple genes (transcripts) and that genes (transcripts) may be [are often] represented with multiple probes. In other word, there is no one-to-one correspondence between genes (transcripts) and probes.
  • Neighboring gene: CG number or gene symbol of gene close to the insertion site

Date: 29 March 2013

 

    Copyright (c) Drosophila Genetic Resource Center.
All rights reserved.
Kyoto DGRC participates in the National BioResource Project "Drosophila."